RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 SLC2A3P11169 496 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 STX17P56962 302 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 SNX16P57768 344 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 ARID5BQ14865 1188 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 PTPRNQ16849 979 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 FAM133BQ5BKY9 247 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 MBLAC2Q68D91 279 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 DQX1Q8TE96 717 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 FCRL2Q96LA5 508 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 MIS12Q9H081 205 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 POPDC2Q9HBU9 364 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 OSGEPQ9NPF4 335 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 ST7Q9NRC1 585 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 TMEM51Q9NW97 253 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 CKAP5Q14008 2032 aa12.65□□□□□ -0.38
GTF3C1-204ENST00000564664 GOLGA6L7A0A1B0GV03 622 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 TMEM8BA6NDV4 472 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 PIK3R2O00459 728 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 BCAT2O15382 392 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 RNASEH1O60930 286 aaKnown RBP12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 GJB3O75712 270 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 LETM1O95202 739 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 MOCS3O95396 460 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 ZNF883P0CG24 379 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 CD59P13987 128 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 SLC6A4P31645 630 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 OXCT1P55809 520 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 ST8SIA6P61647 398 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 YWHAZP63104 245 aaKnown RBP12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 ZNF423Q2M1K9 1284 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 MS4A13Q5J8X5 152 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 DCAF12L1Q5VU92 463 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 RFWD3Q6PCD5 774 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 GBP6Q6ZN66 633 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 MFN1Q8IWA4 741 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 MLKLQ8NB16 471 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 CLEC4CQ8WTT0 213 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 FAM149B1Q96BN6 582 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 ERLEC1Q96DZ1 483 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 LMLNQ96KR4 655 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 BTN2A3PQ96KV6 586 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 PPP1R9BQ96SB3 815 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 LHX5Q9H2C1 402 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 SGK2Q9HBY8 427 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 PRSS16Q9NQE7 514 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 ASNSD1Q9NWL6 643 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 KIAA1522Q9P206 1035 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 NAALADL1Q9UQQ1 740 aa12.64□□□□□ -0.39
GTF3C1-204ENST00000564664 TARSL2A2RTX5 802 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 FAM221BA6H8Z2 402 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 THAP12O43422 761 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 APOEP02649 317 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 DNTTP04053 509 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 SRPRAP08240 638 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 MAOBP27338 520 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 GNA15P30679 374 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 CD70P32970 193 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 FOXC1Q12948 553 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 SLC12A1Q13621 1099 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 EXOC3L4Q17RC7 722 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 TTC31Q49AM3 519 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 EFHC1Q5JVL4 640 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 NADSYN1Q6IA69 706 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 DENND1BQ6P3S1 775 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 TRIM65Q6PJ69 517 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 USP30Q70CQ3 517 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 ATP6V0D2Q8N8Y2 350 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 KDF1Q8NAX2 398 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 C1orf216Q8TAB5 229 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 CYB5D2Q8WUJ1 264 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 BTBD1Q9H0C5 482 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 CD93Q9NPY3 652 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 APEX2Q9UBZ4 518 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 TJP2Q9UDY2 1190 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 TPX2Q9ULW0 747 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 PCDHGC3Q9UN70 934 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 NCKAP1Q9Y2A7 1128 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 NEUROG3Q9Y4Z2 214 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 PCDHB9Q9Y5E1 797 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 PCDH15Q96QU1 1955 aa12.63□□□□□ -0.39
GTF3C1-204ENST00000564664 PAPSS1O43252 624 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 LUC7L3O95232 432 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 CER1O95813 267 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 TRUB2O95900 331 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 IGLV3-25P01717 112 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 HLA-EP13747 358 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 SGSHP51688 502 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 AFF3P51826 1226 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 BPIFB4P59827 614 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 RPS14P62263 151 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 SIM1P81133 766 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 CDK17Q00537 523 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 PTK2Q05397 1052 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 GRIK2Q13002 908 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 EIF4EBP2Q13542 120 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 CDH18Q13634 790 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 TEAD4Q15561 434 aa12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 TTC39BQ5VTQ0 682 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-204ENST00000564664 SYPL2Q5VXT5 272 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms