RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 NEU3Q9UQ49 428 aa10.56□□□□□ -0.72
TUBGCP4-202ENST00000561691 VWA8A3KMH1 1905 aa10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 FOXO6A8MYZ6 492 aa10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 PITPNM1O00562 1244 aa10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 RASGRF2O14827 1237 aa10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 VNN2O95498 520 aa10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 EFEMP2O95967 443 aa10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 AGTP01019 485 aa10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 C1QAP02745 245 aa10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 CXCL10P02778 98 aa10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 ATP2A2P16615 1042 aaKnown RBP10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 CXCR3P49682 368 aa10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 KCNJ2P63252 427 aa10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 USP4Q13107 963 aa10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 BEND5Q7L4P6 421 aa10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 SCD5Q86SK9 330 aa10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 RNF139Q8WU17 664 aa10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 XPO6Q96QU8 1125 aaKnown RBP10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 PCMTD2Q9NV79 361 aa10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 STAP1Q9ULZ2 295 aa10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 HEY1Q9Y5J3 304 aa10.55□□□□□ -0.72
TUBGCP4-202ENST00000561691 GOLGA8MH3BSY2 632 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 H7C0C1 242 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 MFSD11O43934 449 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 TBC1D4O60343 1298 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 GCATO75600 419 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 CREB1P16220 341 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 ATP5OP48047 213 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 NR2C2P49116 596 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 DEUP1Q05D60 604 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 DYNC1I2Q13409 638 aaKnown RBP10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 PAFAH1B3Q15102 231 aaKnown RBP10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 SLC45A4Q5BKX6 768 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 BSPRYQ5W0U4 402 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 KCNT2Q6UVM3 1135 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 ZNF534Q76KX8 674 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 PCGF5Q86SE9 256 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 TAC4Q86UU9 113 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 EXOC3L1Q86VI1 746 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 TAB3Q8N5C8 712 aaPredicted RBP10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 CCDC33Q8N5R6 958 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 SLC7A14Q8TBB6 771 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 BCL7CQ8WUZ0 217 aaPredicted RBP10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 MAML1Q92585 1016 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 EDEM1Q92611 657 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 DPF3Q92784 378 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 IFT43Q96FT9 208 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 SERPINB12Q96P63 405 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 DEFB118Q96PH6 123 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 GPR62Q9BZJ7 368 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 TRIM4Q9C037 500 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 CNOT10Q9H9A5 744 aaKnown RBP10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 PRG3Q9Y2Y8 225 aaPredicted RBP10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 LRRC42Q9Y546 428 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 NR2E3Q9Y5X4 410 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 SF3B1O75533 1304 aaKnown RBP eCLIP10.54□□□□□ -0.721e-6■■■■□ 25.8
TUBGCP4-202ENST00000561691 TTC3P53804 2025 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 SYNJ2BP-COX16A0A087WUM0 186 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 TLDC2A0PJX2 215 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 CFAP69A5D8W1 941 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 SMIM23A6NLE4 172 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 KCNN4O15554 427 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 UPP2O95045 317 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 METTL18O95568 372 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 ZFXP17010 805 aaPredicted RBP10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 OR1G1P47890 313 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 SLC5A3P53794 718 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 YWHAHQ04917 246 aaPredicted RBP10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 NME3Q13232 169 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 BFSP2Q13515 415 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 PRKD1Q15139 912 aaPredicted RBP10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 GALNTL6Q49A17 601 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 HP1BP3Q5SSJ5 553 aaPredicted RBP10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 VSTM1Q6UX27 236 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 RSPO2Q6UXX9 243 aaPredicted RBP10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 TRPM8Q7Z2W7 1104 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 ANKRD33Q7Z3H0 272 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 CAND1Q86VP6 1230 aaKnown RBP10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 ANKS4BQ8N8V4 417 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 NETO2Q8NC67 525 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 MDM1Q8TC05 714 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 DQX1Q8TE96 717 aaKnown RBP10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 SLX1AQ9BQ83 275 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 COLEC11Q9BWP8 271 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 OSER1Q9NX31 292 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 COX16Q9P0S2 106 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 KANSL3Q9P2N6 904 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 SNX10Q9Y5X0 201 aa10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.54□□□□□ -0.72
TUBGCP4-202ENST00000561691 TANC1Q9C0D5 1861 aa10.53□□□□□ -0.72
TUBGCP4-202ENST00000561691 SCN5AQ14524 2016 aa10.53□□□□□ -0.72
TUBGCP4-202ENST00000561691 ZNF638Q14966 1978 aaKnown RBP10.53□□□□□ -0.72
TUBGCP4-202ENST00000561691 CHADO15335 359 aa10.53□□□□□ -0.72
TUBGCP4-202ENST00000561691 RGS16O15492 202 aaPredicted RBP10.53□□□□□ -0.72
TUBGCP4-202ENST00000561691 NCAM1P13591 858 aa10.53□□□□□ -0.72
TUBGCP4-202ENST00000561691 DESP17661 470 aa10.53□□□□□ -0.72
TUBGCP4-202ENST00000561691 GNAZP19086 355 aa10.53□□□□□ -0.72
TUBGCP4-202ENST00000561691 FGFR3P22607 806 aa10.53□□□□□ -0.72
TUBGCP4-202ENST00000561691 TPP2P29144 1249 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms