RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 TMEM25Q86YD3 366 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 SMC5Q8IY18 1101 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 SAP25Q8TEE9 199 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 SKA1Q96BD8 255 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 OTUB2Q96DC9 234 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 SGF29Q96ES7 293 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 DEPDC7Q96QD5 511 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 XPO6Q96QU8 1125 aaKnown RBP5.64□□□□□ -1.51
HERC1-213ENST00000561359 SEMA3CQ99985 751 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 LSG1Q9H089 658 aaKnown RBP5.64□□□□□ -1.51
HERC1-213ENST00000561359 RNF38Q9H0F5 515 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 SLC25A18Q9H1K4 315 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 RWDD1Q9H446 243 aaPredicted RBP5.64□□□□□ -1.51
HERC1-213ENST00000561359 ABCB6Q9NP58 842 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 OSGEPQ9NPF4 335 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 SPHK2Q9NRA0 654 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 LATS2Q9NRM7 1088 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.64□□□□□ -1.51
HERC1-213ENST00000561359 STON1Q9Y6Q2 735 aa5.64□□□□□ -1.51
HERC1-213ENST00000561359 PCNX1Q96RV3 2341 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 NAV3Q8IVL0 2385 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 NEDD8-MDP1E9PL57 170 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 VILLO15195 856 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 CLDN3O15551 220 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 CSO75390 466 aaKnown RBP5.63□□□□□ -1.51
HERC1-213ENST00000561359 GJB6O95452 261 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 SEMA4FO95754 770 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 IGLV3-19P01714 112 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 TNFRSF8P28908 595 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 ACSL1P33121 698 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 BCAT1P54687 386 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 GRIN1Q05586 938 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 SSRP1Q08945 709 aaKnown RBP5.63□□□□□ -1.51
HERC1-213ENST00000561359 STRN3Q13033 797 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 PDIA5Q14554 519 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 NECTIN1Q15223 517 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 NPY5RQ15761 445 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 NTRK3Q16288 839 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 CALCRLQ16602 461 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 C3orf38Q5JPI3 329 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 SPATA1Q5VX52 437 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 CATSPER3Q86XQ3 398 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 SPATA2LQ8IUW3 424 aaPredicted RBP5.63□□□□□ -1.51
HERC1-213ENST00000561359 SRRM1Q8IYB3 904 aaKnown RBP5.63□□□□□ -1.51
HERC1-213ENST00000561359 LEO1Q8WVC0 666 aaPredicted RBP5.63□□□□□ -1.51
HERC1-213ENST00000561359 FOXD4L4Q8WXT5 416 aaPredicted RBP5.63□□□□□ -1.51
HERC1-213ENST00000561359 BRF1Q92994 677 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 UTP4Q969X6 686 aaKnown RBP5.63□□□□□ -1.51
HERC1-213ENST00000561359 BIRC7Q96CA5 298 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 TRIM9Q9C026 710 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 ZNF768Q9H5H4 540 aaKnown RBP5.63□□□□□ -1.51
HERC1-213ENST00000561359 NCOA5Q9HCD5 579 aaKnown RBP5.63□□□□□ -1.51
HERC1-213ENST00000561359 TUFT1Q9NNX1 390 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 KMT5AQ9NQR1 393 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 SOX13Q9UN79 622 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 KCNJ14Q9UNX9 436 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 SH3BP1Q9Y3L3 701 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 DENND4CQ5VZ89 1909 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 NF1P21359 2839 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 NUMA1Q14980 2115 aa5.63□□□□□ -1.51
HERC1-213ENST00000561359 FBN3Q75N90 2809 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 OTOGQ6ZRI0 2925 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 CITO14578 2027 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 ZNF840PA6NDX5 716 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 PIRO00625 290 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 SLC16A4O15374 487 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 OPA1O60313 960 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 TSPAN3O60637 253 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 ADAM11O75078 769 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 MED24O75448 989 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 AGFG2O95081 481 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 DEXIO95424 95 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 TYRP14679 529 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 FSTP19883 344 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 ACP1P24666 158 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 ACAT1P24752 427 aaKnown RBP5.62□□□□□ -1.51
HERC1-213ENST00000561359 EPHA8P29322 1005 aaPredicted RBP5.62□□□□□ -1.51
HERC1-213ENST00000561359 TAF6P49848 677 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 ZNF132P52740 706 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 RACK1P63244 317 aaKnown RBP5.62□□□□□ -1.51
HERC1-213ENST00000561359 ASIC1P78348 528 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 CCT2P78371 535 aaKnown RBP5.62□□□□□ -1.51
HERC1-213ENST00000561359 DAB2P98082 770 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 MCL1Q07820 350 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 BNIP3Q12983 259 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 TMEM132DQ14C87 1099 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 SHBQ15464 509 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 ADCK5Q3MIX3 580 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 JADE1Q6IE81 842 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 FDX2Q6P4F2 183 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 Q6ZS46 218 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 TPGS1Q6ZTW0 290 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 Q6ZUG5 572 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 DENND5BQ6ZUT9 1274 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 BBS7Q8IWZ6 715 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 SPATA20Q8TB22 786 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 ZNF564Q8TBZ8 553 aaPredicted RBP5.62□□□□□ -1.51
HERC1-213ENST00000561359 BICD1Q96G01 975 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 AIFM3Q96NN9 605 aa5.62□□□□□ -1.51
HERC1-213ENST00000561359 SLC46A1Q96NT5 459 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms