RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 GOLGA6L7A0A1B0GV03 622 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 A0A1B0GVM2 712 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 FAM86C2PA6NEL3 165 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 TCAF2A6NFQ2 919 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 H3BRJ5 948 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 ARHGAP6O43182 974 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 CCP110O43303 1012 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 RNASEH1O60930 286 aaKnown RBP11.06□□□□□ -0.64
TPM1-229ENST00000561242 TULP3O75386 442 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 KLKB1P03952 638 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 ASLP04424 464 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 FYNP06241 537 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 RHOCP08134 193 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 TNNT1P13805 278 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 AOC1P19801 751 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 EPHB2P29323 1055 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 HTR7P34969 479 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 TIE1P35590 1138 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 RECQLP46063 649 aaPredicted RBP11.06□□□□□ -0.64
TPM1-229ENST00000561242 CXCL12P48061 93 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 CCR3P51677 355 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 CDH4P55283 916 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 TPI1P60174 286 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 MRPS21P82921 87 aaKnown RBP11.06□□□□□ -0.64
TPM1-229ENST00000561242 PTP4A2Q12974 167 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 AUHQ13825 339 aaKnown RBP11.06□□□□□ -0.64
TPM1-229ENST00000561242 BYSLQ13895 437 aaKnown RBP11.06□□□□□ -0.64
TPM1-229ENST00000561242 ARID5BQ14865 1188 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 EIF4HQ15056 248 aaKnown RBP11.06□□□□□ -0.64
TPM1-229ENST00000561242 ACCSLQ4AC99 568 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 FNDC3BQ53EP0 1204 aaKnown RBP11.06□□□□□ -0.64
TPM1-229ENST00000561242 C2orf27AQ580R0 203 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 PIK3R6Q5UE93 754 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 E4F1Q66K89 784 aaPredicted RBP11.06□□□□□ -0.64
TPM1-229ENST00000561242 BHLHA9Q7RTU4 235 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 PSTKQ8IV42 348 aaKnown RBP11.06□□□□□ -0.64
TPM1-229ENST00000561242 CHPFQ8IZ52 775 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 AHI1Q8N157 1196 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 PJA1Q8NG27 643 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 SLC35G2Q8TBE7 412 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 RFFLQ8WZ73 363 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 HSPH1Q92598 858 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 SLC39A13Q96H72 371 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 ZFRQ96KR1 1074 aaKnown RBP11.06□□□□□ -0.64
TPM1-229ENST00000561242 CCDC114Q96M63 670 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 FERMT1Q9BQL6 677 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 SPON2Q9BUD6 331 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 OSBPL2Q9H1P3 480 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 ARHGEF38Q9NXL2 777 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 MARK1Q9P0L2 795 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 SUN2Q9UH99 717 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 USP18Q9UMW8 372 aa11.06□□□□□ -0.64
TPM1-229ENST00000561242 RANBP2P49792 3224 aaKnown RBP11.05□□□□□ -0.64
TPM1-229ENST00000561242 KRBA1A5PL33 1030 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 E9PAM4 449 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 EEF2KO00418 725 aaKnown RBP11.05□□□□□ -0.64
TPM1-229ENST00000561242 NRG2O14511 850 aaPredicted RBP11.05□□□□□ -0.64
TPM1-229ENST00000561242 AP5Z1O43299 807 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 CACNG3O60359 315 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 LUC7L3O95232 432 aaKnown RBP11.05□□□□□ -0.64
TPM1-229ENST00000561242 GJB6O95452 261 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 IGLV3-27P01718 113 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 DCNP07585 359 aaKnown RBP11.05□□□□□ -0.64
TPM1-229ENST00000561242 CCDC175P0C221 793 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 AVPR2P30518 371 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 PCK1P35558 622 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 GEMIN4P57678 1058 aaKnown RBP11.05□□□□□ -0.64
TPM1-229ENST00000561242 RPL7AP62424 266 aaKnown RBP11.05□□□□□ -0.64
TPM1-229ENST00000561242 PPP6R3Q5H9R7 873 aaPredicted RBP11.05□□□□□ -0.64
TPM1-229ENST00000561242 TMEM196Q5HYL7 178 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 CCDC181Q5TID7 509 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 IL31Q6EBC2 164 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 CHST9Q7L1S5 443 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 DAAM2Q86T65 1068 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 CFAP52Q8N1V2 620 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 BBS5Q8N3I7 341 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 ZNF513Q8N8E2 541 aaPredicted RBP11.05□□□□□ -0.64
TPM1-229ENST00000561242 NTAN1Q96AB6 310 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 ASIC4Q96FT7 647 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 PIWIL1Q96J94 861 aaKnown RBP11.05□□□□□ -0.64
TPM1-229ENST00000561242 ZNF830Q96NB3 372 aaPredicted RBP11.05□□□□□ -0.64
TPM1-229ENST00000561242 ALS2CR12Q96Q35 445 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 FOXQ1Q9C009 403 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 ABCB8Q9NUT2 735 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 DDX56Q9NY93 547 aaKnown RBP11.05□□□□□ -0.64
TPM1-229ENST00000561242 GGA2Q9UJY4 613 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 STOML2Q9UJZ1 356 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 VPS28Q9UK41 221 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 AP4E1Q9UPM8 1137 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 HS3ST4Q9Y661 456 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 TSC2P49815 1807 aa11.05□□□□□ -0.64
TPM1-229ENST00000561242 MTCL1Q9Y4B5 1905 aaKnown RBP11.04□□□□□ -0.64
TPM1-229ENST00000561242 SOWAHDA6NJG2 315 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 FGF10O15520 208 aaPredicted RBP11.04□□□□□ -0.64
TPM1-229ENST00000561242 ZSCAN12O43309 604 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 ENDOD1O94919 500 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 ACADMP11310 421 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 PABPC1P11940 636 aaKnown RBP11.04□□□□□ -0.64
TPM1-229ENST00000561242 L1CAMP32004 1257 aa11.04□□□□□ -0.64
TPM1-229ENST00000561242 RPS9P46781 194 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms