RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 XPNPEP1Q9NQW7 623 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 KCNH7Q9NS40 1196 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 RNASEH2AO75792 299 aaKnown RBP16.47■□□□□ 0.23
PBX1-219ENST00000560641 TOMM70O94826 608 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 CFBP00751 764 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 FUCA1P04066 466 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 GRSF1Q12849 480 aaKnown RBP eCLIP16.47■□□□□ 0.23
PBX1-219ENST00000560641 PDK1Q15118 436 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 CENPSQ8N2Z9 138 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 CNTD1Q8N815 330 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 MFSD2AQ8NA29 543 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 TNIP2Q8NFZ5 429 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 ZNF512Q96ME7 567 aaPredicted RBP16.47■□□□□ 0.23
PBX1-219ENST00000560641 PDLIM7Q9NR12 457 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 UTP6Q9NYH9 597 aaKnown RBP16.47■□□□□ 0.23
PBX1-219ENST00000560641 HESX1Q9UBX0 185 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 TAL1P17542 331 aaPredicted RBP16.47■□□□□ 0.23
PBX1-219ENST00000560641 PSMA2P25787 234 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 ESRRGP62508 458 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 NHSL2Q5HYW2 709 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 SPOPLQ6IQ16 392 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 GADL1Q6ZQY3 521 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 LYSMD3Q7Z3D4 306 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 RFX6Q8HWS3 928 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 C10orf107Q8IVU9 208 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 CERS5Q8N5B7 392 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 RDM1Q8NG50 284 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 FAM213AQ9BRX8 229 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 LIN28AQ9H9Z2 209 aaKnown RBP16.47■□□□□ 0.23
PBX1-219ENST00000560641 SELENONQ9NZV5 590 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 POLLQ9UGP5 575 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 SARDHQ9UL12 918 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 AP4S1Q9Y587 144 aa16.47■□□□□ 0.23
PBX1-219ENST00000560641 ZNF487B1APH4 448 aa16.46■□□□□ 0.23
PBX1-219ENST00000560641 STAM2O75886 525 aa16.46■□□□□ 0.23
PBX1-219ENST00000560641 NCF2P19878 526 aaPredicted RBP16.46■□□□□ 0.23
PBX1-219ENST00000560641 TRAP1Q12931 704 aaKnown RBP16.46■□□□□ 0.23
PBX1-219ENST00000560641 ZYXQ15942 572 aaKnown RBP16.46■□□□□ 0.23
PBX1-219ENST00000560641 ANKDD1AQ495B1 522 aa16.46■□□□□ 0.23
PBX1-219ENST00000560641 RSBN1LQ6PCB5 846 aaPredicted RBP16.46■□□□□ 0.23
PBX1-219ENST00000560641 TAS1R3Q7RTX0 852 aa16.46■□□□□ 0.23
PBX1-219ENST00000560641 KIAA0319LQ8IZA0 1049 aa16.46■□□□□ 0.23
PBX1-219ENST00000560641 ANKFN1Q8N957 763 aa16.46■□□□□ 0.23
PBX1-219ENST00000560641 CGRRF1Q99675 332 aa16.46■□□□□ 0.23
PBX1-219ENST00000560641 RPF2Q9H7B2 306 aaKnown RBP16.46■□□□□ 0.23
PBX1-219ENST00000560641 NUB1Q9Y5A7 615 aa16.46■□□□□ 0.23
PBX1-219ENST00000560641 HEMK1Q9Y5R4 338 aaPredicted RBP16.46■□□□□ 0.23
PBX1-219ENST00000560641 PTPRJQ12913 1337 aa16.46■□□□□ 0.23
PBX1-219ENST00000560641 RALBP11234 206 aa16.46■□□□□ 0.23
PBX1-219ENST00000560641 NUDT2P50583 147 aa16.46■□□□□ 0.23
PBX1-219ENST00000560641 JAK3P52333 1124 aa16.46■□□□□ 0.23
PBX1-219ENST00000560641 TFDP2Q14188 446 aa16.46■□□□□ 0.23
PBX1-219ENST00000560641 MROH9Q5TGP6 573 aa16.46■□□□□ 0.23
PBX1-219ENST00000560641 RSPH3Q86UC2 560 aa16.46■□□□□ 0.23
PBX1-219ENST00000560641 BSNDQ8WZ55 320 aa16.46■□□□□ 0.23
PBX1-219ENST00000560641 CDRT15Q96T59 188 aa16.46■□□□□ 0.23
PBX1-219ENST00000560641 EBF1Q9UH73 591 aa16.46■□□□□ 0.23
PBX1-219ENST00000560641 SRP68Q9UHB9 627 aaKnown RBP16.46■□□□□ 0.23
PBX1-219ENST00000560641 LOC100653049A0A140TA62 436 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 GOLGA8TH3BQL2 631 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 PSMD12O00232 456 aaPredicted RBP16.45■□□□□ 0.22
PBX1-219ENST00000560641 KRT34O76011 436 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 TRUB2O95900 331 aaKnown RBP16.45■□□□□ 0.22
PBX1-219ENST00000560641 HSPA1AP0DMV8 641 aaKnown RBP16.45■□□□□ 0.22
PBX1-219ENST00000560641 HSPA1BP0DMV9 641 aaKnown RBP16.45■□□□□ 0.22
PBX1-219ENST00000560641 C21orf59P57076 290 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 GRM1Q13255 1194 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 FAM102BQ5T8I3 360 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 DEPDC1Q5TB30 811 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 TFAP2CQ92754 450 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 TUBA1CQ9BQE3 449 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 PSD2Q9BQI7 771 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 GPATCH1Q9BRR8 931 aaKnown RBP16.45■□□□□ 0.22
PBX1-219ENST00000560641 RAB6BQ9NRW1 208 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 HOMER2Q9NSB8 354 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 CLEC11AQ9Y240 323 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 DYTNA2CJ06 578 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 TRIM38O00635 465 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 SNAP91O60641 907 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 C7P10643 843 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 TGM2P21980 687 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 SFNP31947 248 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 RFC1P35251 1148 aaPredicted RBP16.45■□□□□ 0.22
PBX1-219ENST00000560641 SLC5A3P53794 718 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 NANOGP8Q6NSW7 305 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 PPP4R4Q6NUP7 873 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 NEPROQ6NW34 567 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 UNC5BQ8IZJ1 945 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 EFCAB3Q8N7B9 438 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 DUS2Q9NX74 493 aaKnown RBP16.45■□□□□ 0.22
PBX1-219ENST00000560641 BBOX1O75936 387 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 MLNP12872 115 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 MX2P20592 715 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 MYF6P23409 242 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 POLR2BP30876 1174 aaKnown RBP16.45■□□□□ 0.22
PBX1-219ENST00000560641 AP3M2P53677 418 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 PPIL2Q13356 520 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 PEX6Q13608 980 aa16.45■□□□□ 0.22
PBX1-219ENST00000560641 SHROOM1Q2M3G4 852 aaPredicted RBP16.45■□□□□ 0.22
PBX1-219ENST00000560641 TRMT10BQ6PF06 316 aaKnown RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms