RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 UNKQ9C0B0 810 aaKnown RBP5.95□□□□□ -1.46
VRK1-203ENST00000555067 PNPLA8Q9NP80 782 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 GJB4Q9NTQ9 266 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 LRFN1Q9P244 771 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 STEAP1Q9UHE8 339 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 CEP83Q9Y592 693 aa5.95□□□□□ -1.46
VRK1-203ENST00000555067 CLIC1O00299 241 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 CTSAP10619 480 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 TACR3P29371 465 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 ITGA8P53708 1063 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 SLC35G1Q2M3R5 365 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 ZACNQ401N2 412 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 JMJD6Q6NYC1 403 aaPredicted RBP5.94□□□□□ -1.46
VRK1-203ENST00000555067 C4orf50Q6ZRC1 276 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 UBE2Q1Q7Z7E8 422 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 SESTD1Q86VW0 696 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 YAF2Q8IY57 180 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 TTC30BQ8N4P2 665 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 ADAMTS15Q8TE58 950 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 C18orf8Q96DM3 657 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 EDC3Q96F86 508 aaKnown RBP5.94□□□□□ -1.46
VRK1-203ENST00000555067 VPS50Q96JG6 964 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 BARD1Q99728 777 aaKnown RBP5.94□□□□□ -1.46
VRK1-203ENST00000555067 COLEC11Q9BWP8 271 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 OBP2BQ9NPH6 170 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 POT1Q9NUX5 634 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 TMEM184CQ9NVA4 438 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 OGDHLQ9ULD0 1010 aa5.94□□□□□ -1.46
VRK1-203ENST00000555067 CCDC187A0A096LP49 1063 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 B4E171 279 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 TXNP10599 105 aaKnown RBP5.93□□□□□ -1.46
VRK1-203ENST00000555067 TPH1P17752 444 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 ADRA1DP25100 572 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 TSPAN7P41732 249 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 TUBP50607 506 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 RPS16P62249 146 aaKnown RBP5.93□□□□□ -1.46
VRK1-203ENST00000555067 TXNL4AP83876 142 aaKnown RBP5.93□□□□□ -1.46
VRK1-203ENST00000555067 SLC9C1Q4G0N8 1177 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 SLC45A4Q5BKX6 768 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 FAM133BQ5BKY9 247 aaKnown RBP5.93□□□□□ -1.46
VRK1-203ENST00000555067 ARFGAP1Q8N6T3 406 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 IPCEF1Q8WWN9 437 aaPredicted RBP5.93□□□□□ -1.46
VRK1-203ENST00000555067 ZNF566Q969W8 418 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 ZFYVE19Q96K21 471 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 TRMOQ9BU70 441 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 ALDH8A1Q9H2A2 487 aaPredicted RBP5.93□□□□□ -1.46
VRK1-203ENST00000555067 PLEKHA5Q9HAU0 1116 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 UBN1Q9NPG3 1134 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 SMYD2Q9NRG4 433 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 DACT1Q9NYF0 836 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 HEY2Q9UBP5 337 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 MID2Q9UJV3 735 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 TMEM98Q9Y2Y6 226 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 RPGRIP1LQ68CZ1 1315 aa5.93□□□□□ -1.46
VRK1-203ENST00000555067 A0A1W2PPC4 97 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 A0A1W2PRQ8 180 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 GOLGA6L3A6NEY3 463 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 A6NLC8 198 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 LGALS16A8MUM7 142 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 AGPSO00116 658 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 RAB27BO00194 218 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 TMCC2O75069 709 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 CYP19A1P11511 503 aaPredicted RBP5.92□□□□□ -1.46
VRK1-203ENST00000555067 ATP1A3P13637 1013 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 EEF1GP26641 437 aaKnown RBP5.92□□□□□ -1.46
VRK1-203ENST00000555067 KRT9P35527 623 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 ME1P48163 572 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 CLCA4Q14CN2 919 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 C3orf38Q5JPI3 329 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 SPECC1Q5M775 1068 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 SPATA1Q5VX52 437 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 USP49Q70CQ1 688 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 HEATR4Q86WZ0 1026 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 GALNT15Q8N3T1 639 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 PCYOX1LQ8NBM8 494 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 MPLKIPQ8TAP9 179 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 KAZALD1Q96I82 304 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 FAM167BQ9BTA0 163 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 WASH6PQ9NQA3 447 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 COL20A1Q9P218 1284 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 DNAJB11Q9UBS4 358 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 DKK4Q9UBT3 224 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 ITGB1BP2Q9UKP3 347 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 FZD4Q9ULV1 537 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 NOTCH4Q99466 2003 aa5.92□□□□□ -1.46
VRK1-203ENST00000555067 IGKV2D-30A0A075B6S6 120 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 ACKR2O00590 384 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 NPC1O15118 1278 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 IRAK2O43187 625 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 IL1R1P14778 569 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 RAD52P43351 418 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 EIF4A1P60842 406 aaKnown RBP5.91□□□□□ -1.46
VRK1-203ENST00000555067 GPC5P78333 572 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 DEUP1Q05D60 604 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 SLC14A1Q13336 389 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 PFKFB3Q16875 520 aaPredicted RBP5.91□□□□□ -1.46
VRK1-203ENST00000555067 LEXMQ3ZCV2 418 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 CCDC30Q5VVM6 783 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 ITPRIPL1Q6GPH6 555 aa5.91□□□□□ -1.46
VRK1-203ENST00000555067 DLK2Q6UY11 383 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms