RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 MFSD6LQ8IWD5 586 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 KIRREL3Q8IZU9 778 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 SPICE1Q8N0Z3 855 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 CCDC33Q8N5R6 958 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 CNTD1Q8N815 330 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 PDPRQ8NCN5 879 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 IFT74Q96LB3 600 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 SPATA13Q96N96 652 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 CCDC115Q96NT0 180 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 CPNE1Q99829 537 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 SH2D3AQ9BRG2 576 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 MLPHQ9BV36 600 aaPredicted RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 BRINP2Q9C0B6 783 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 RAVER2Q9HCJ3 691 aaKnown RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 IGSF5Q9NSI5 407 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 NRBP2Q9NSY0 501 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 OXSMQ9NWU1 459 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 DTLQ9NZJ0 730 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 TRBV5-3A0A0A0MS03 114 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 TMEM150BA6NC51 233 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 ERICH4A6NGS2 130 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 LACTBL1A8MY62 500 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 PSMD3O43242 534 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 MAP3K13O43283 966 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 ADCY6O43306 1168 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 MGEA5O60502 916 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 MRPS14O60783 128 aaKnown RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 ZNF26P17031 533 aaPredicted RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 PNPLA4P41247 253 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 GRIA2P42262 883 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 MATKP42679 507 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 LEPRP48357 1165 aaKnown RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 LIG3P49916 1009 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 GZMMP51124 257 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 CACNB3P54284 484 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 USP46P62068 366 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 TUBA4AP68366 448 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 LAMC2Q13753 1193 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 HIF1AQ16665 826 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 SOWAHAQ2M3V2 549 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 INTS11Q5TA45 600 aaKnown RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 WDR78Q5VTH9 848 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 CWF19L1Q69YN2 538 aaKnown RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 TTC23LQ6PF05 361 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 PACS1Q6VY07 963 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 KIAA0408Q6ZU52 694 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 NLRP9Q7RTR0 991 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 CARNMT1Q8N4J0 409 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 PIP4K2CQ8TBX8 421 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 UBLCP1Q8WVY7 318 aaPredicted RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 IFT81Q8WYA0 676 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 POP5Q969H6 163 aaKnown RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 SLCO4A1Q96BD0 722 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 PDLIM5Q96HC4 596 aaKnown RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 HHIPL1Q96JK4 782 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 CSPG4P5Q96PW8 444 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 FCRL5Q96RD9 977 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 MANSC1Q9H8J5 431 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 MAGEE1Q9HCI5 957 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 VAT1LQ9HCJ6 419 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 ANLNQ9NQW6 1124 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 NSMCE4AQ9NXX6 385 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 C6orf203Q9P0P8 240 aaPredicted RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 KLHL42Q9P2K6 505 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 SLC17A7Q9P2U7 560 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 DCDC2Q9UHG0 476 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 TAGLN3Q9UI15 199 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 VWA7Q9Y334 891 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 PPIL1Q9Y3C6 166 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 CCL27Q9Y4X3 112 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 CPAMD8Q8IZJ3 1885 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 BCAS2O75934 225 aaPredicted RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 F11P03951 625 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 ALDH2P05091 517 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 PRKCBP05771 671 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 APOA4P06727 396 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 MMP3P08254 477 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 GAAP10253 952 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 HOXB6P17509 224 aaKnown RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 SP100P23497 879 aaPredicted RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 VHLP40337 213 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 SERPINB4P48594 390 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 NPY2RP49146 381 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 ATP1A2P50993 1020 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 PDE1CQ14123 709 aaPredicted RBP3.55□□□□□ -1.84
SEC23A-207ENST00000554615 TFDP1Q14186 410 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 TFDP2Q14188 446 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 MESDQ14696 234 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 CRY1Q16526 586 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 USH1GQ495M9 461 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 DUSP28Q4G0W2 176 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 DNAL1Q4LDG9 190 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 C6orf10Q5SRN2 563 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 ATF7IP2Q5U623 682 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 DPP9Q86TI2 863 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 RIMKLAQ8IXN7 391 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 ZMIZ2Q8NF64 920 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 PJA1Q8NG27 643 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 ACTL9Q8TC94 416 aa3.55□□□□□ -1.84
SEC23A-207ENST00000554615 FBF1Q8TES7 1133 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms