RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 TULP3O75386 442 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 CTDNEP1O95476 244 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 NCAM1P13591 858 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 PLS3P13797 630 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 ARNTP27540 789 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 CDC25AP30304 524 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 NTF4P34130 210 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 GRK6P43250 576 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 CXADRP78310 365 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 RHDQ02161 417 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 TLE3Q04726 772 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 TMEM132DQ14C87 1099 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 RTP5Q14D33 572 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 CFAP221Q4G0U5 840 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 LY6G5CQ5SRR4 150 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 C10orf76Q5T2E6 689 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 NXPE4Q6UWF7 544 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 DIS3L2Q8IYB7 885 aaKnown RBP7.3□□□□□ -1.24
ATXN3-224ENST00000554040 NAT16Q8N8M0 369 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 ENGASEQ8NFI3 743 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 FGF11Q92914 225 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 TOE1Q96GM8 510 aaKnown RBP7.3□□□□□ -1.24
ATXN3-224ENST00000554040 MRGPRX1Q96LB2 322 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 ACOX2Q99424 681 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 PKMYT1Q99640 499 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 GABRG3Q99928 467 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 TIPINQ9BVW5 301 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 SEMA4CQ9C0C4 833 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 MBNL3Q9NUK0 354 aaKnown RBP7.3□□□□□ -1.24
ATXN3-224ENST00000554040 WSB2Q9NYS7 404 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-224ENST00000554040 TRPM5Q9NZQ8 1165 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 CFAP97Q9P2B7 532 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 TBC1D14Q9P2M4 693 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 DEC1Q9P2X7 70 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 CPSF3Q9UKF6 684 aaKnown RBP7.3□□□□□ -1.24
ATXN3-224ENST00000554040 GTF3C4Q9UKN8 822 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 PCDHGA1Q9Y5H4 931 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 CYP46A1Q9Y6A2 500 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 HELZP42694 1942 aaKnown RBP7.3□□□□□ -1.24
ATXN3-224ENST00000554040 PLXND1Q9Y4D7 1925 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 DOPEY2Q9Y3R5 2298 aa7.3□□□□□ -1.24
ATXN3-224ENST00000554040 A0A0B4J269 797 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 A0A1B0GVT2 93 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 E9PMD0 336 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 SCAMP3O14828 347 aaKnown RBP7.29□□□□□ -1.24
ATXN3-224ENST00000554040 TRIM24O15164 1050 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 HOXC11O43248 304 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-224ENST00000554040 RNGTTO60942 597 aaKnown RBP7.29□□□□□ -1.24
ATXN3-224ENST00000554040 CDC45O75419 566 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 OLFM2O95897 454 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 NTRK1P04629 796 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 RNASE1P07998 156 aaKnown RBP7.29□□□□□ -1.24
ATXN3-224ENST00000554040 OR52Z1P0C646 297 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 CDK4P11802 303 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 C6P13671 934 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 FDPSP14324 419 aaKnown RBP7.29□□□□□ -1.24
ATXN3-224ENST00000554040 GUCY2CP25092 1073 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 HNF1BP35680 557 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 IL12RB1P42701 662 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 PPP3CCP48454 512 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 CSRP3P50461 194 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 SF3A1Q15459 793 aaKnown RBP7.29□□□□□ -1.24
ATXN3-224ENST00000554040 ZNF174Q15697 407 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 KIF19Q2TAC6 998 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.29□□□□□ -1.24
ATXN3-224ENST00000554040 DCAF12L1Q5VU92 463 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 BTBD8Q5XKL5 378 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 EGFLAMQ63HQ2 1017 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 KIAA1324Q6UXG2 1013 aaKnown RBP7.29□□□□□ -1.24
ATXN3-224ENST00000554040 FMNL3Q8IVF7 1028 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 SCN4BQ8IWT1 228 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 CHPFQ8IZ52 775 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 PDCL2Q8N4E4 241 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 TERB1Q8NA31 727 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 GPBAR1Q8TDU6 330 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 KCNN1Q92952 543 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 OTUB2Q96DC9 234 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 ERLEC1Q96DZ1 483 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 BICD1Q96G01 975 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 TMEM176AQ96HP8 235 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 FUBP3Q96I24 572 aaKnown RBP eCLIP7.29□□□□□ -1.24
ATXN3-224ENST00000554040 SPATA17Q96L03 361 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 CEP295NLQ96MC4 621 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 HEXIM2Q96MH2 286 aaKnown RBP7.29□□□□□ -1.24
ATXN3-224ENST00000554040 GPR174Q9BXC1 333 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 SLC6A17Q9H1V8 727 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 ASB7Q9H672 318 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 ITM2CQ9NQX7 267 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 SMPD4Q9NXE4 827 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 DDX43Q9NXZ2 648 aaKnown RBP7.29□□□□□ -1.24
ATXN3-224ENST00000554040 DPP3Q9NY33 737 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 GMIPQ9P107 970 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 LRWD1Q9UFC0 647 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 C2CD2Q9Y426 696 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 PCDHB6Q9Y5E3 794 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 MYOFQ9NZM1 2061 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 TEX15Q9BXT5 2789 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 KIAA1549LQ6ZVL6 1849 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 DENND4CQ5VZ89 1909 aa7.29□□□□□ -1.24
ATXN3-224ENST00000554040 CREBBPQ92793 2442 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms