RNA–Protein interactions for RNA: ENST00000553993.1

TRAV32-201, Transcript of T cell receptor alpha variable 32 (pseudogene), humanhuman

BASIC

Gene TRAV32, Length 340 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV32-201ENST00000553993 TBC1D3BA6NDS4 549 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 TBC1D3FA6NER0 549 aaPredicted RBP3.03□□□□□ -1.92
TRAV32-201ENST00000553993 KIF28PB7ZC32 967 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 TBC1D3LB9A6J9 549 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 M0QYT0 321 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 UGDHO60701 494 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 TULP3O75386 442 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 CNTN5O94779 1100 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 TNFRSF6BO95407 300 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 SGPL1O95470 568 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 ITGA2BP08514 1039 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 TBC1D3HP0C7X1 549 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 TGM2P21980 687 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 SERPINB3P29508 390 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 GRK5P34947 590 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 IL6STP40189 918 aaPredicted RBP3.03□□□□□ -1.92
TRAV32-201ENST00000553993 POLGP54098 1239 aaPredicted RBP3.03□□□□□ -1.92
TRAV32-201ENST00000553993 SLC37A1P57057 533 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 TAS2R50P59544 299 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 KRTAP10-11P60412 298 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 B4GALNT1Q00973 533 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 TLE3Q04726 772 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 SRSF1Q07955 248 aaKnown RBP eCLIP3.03□□□□□ -1.92
TRAV32-201ENST00000553993 SF3A3Q12874 501 aaKnown RBP eCLIP3.03□□□□□ -1.92
TRAV32-201ENST00000553993 BTBD16Q32M84 506 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 ATPAF1Q5TC12 328 aaPredicted RBP3.03□□□□□ -1.92
TRAV32-201ENST00000553993 TBC1D3GQ6DHY5 549 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 TBC1D3CQ6IPX1 549 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 TMEM88Q6PEY1 159 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 C1orf228Q6PIY5 440 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 ZNF474Q6S9Z5 364 aaPredicted RBP3.03□□□□□ -1.92
TRAV32-201ENST00000553993 LRIG3Q6UXM1 1119 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 PIP4P1Q86T03 277 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 MYLK4Q86YV6 388 aaPredicted RBP3.03□□□□□ -1.92
TRAV32-201ENST00000553993 TBC1D3Q8IZP1 549 aaPredicted RBP3.03□□□□□ -1.92
TRAV32-201ENST00000553993 OR4N4Q8N0Y3 316 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 Q8N9P0 234 aaPredicted RBP3.03□□□□□ -1.92
TRAV32-201ENST00000553993 SLC44A5Q8NCS7 719 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 ZNF548Q8NEK5 533 aaPredicted RBP3.03□□□□□ -1.92
TRAV32-201ENST00000553993 STYXQ8WUJ0 223 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 ZBTB9Q96C00 473 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 TMEM120AQ9BXJ8 343 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 OBP2BQ9NPH6 170 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 RAB21Q9UL25 225 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 TRPC5Q9UL62 973 aaPredicted RBP3.03□□□□□ -1.92
TRAV32-201ENST00000553993 SLC12A4Q9UP95 1085 aa3.03□□□□□ -1.92
TRAV32-201ENST00000553993 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.03□□□□□ -1.92
TRAV32-201ENST00000553993 TTBK1Q5TCY1 1321 aaPredicted RBP3.02□□□□□ -1.93
TRAV32-201ENST00000553993 ABHD14A-ACY1A0A1B0GW23 586 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 LGALS16A8MUM7 142 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 H3BNX3 289 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 PRPF4O43172 522 aaKnown RBP eCLIP3.02□□□□□ -1.93
TRAV32-201ENST00000553993 PPP6R2O75170 966 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 KAT7O95251 611 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 LARGE1O95461 756 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 NFATC1O95644 943 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 SYF2O95926 243 aaKnown RBP3.02□□□□□ -1.93
TRAV32-201ENST00000553993 RFPL3SP0C7P2 107 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 CIITAP33076 1130 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 HTR3AP46098 478 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 RPL15P61313 204 aaKnown RBP3.02□□□□□ -1.93
TRAV32-201ENST00000553993 ICA1Q05084 483 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 UBE4AQ14139 1066 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 PTK2BQ14289 1009 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 PUM3Q15397 648 aaKnown RBP3.02□□□□□ -1.93
TRAV32-201ENST00000553993 TWIST1Q15672 202 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 ZACNQ401N2 412 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 MIDNQ504T8 468 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 MANEAQ5SRI9 462 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 AWAT2Q6E213 333 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 COLCA1Q6ZS62 124 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 IRF2BP2Q7Z5L9 587 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 TECPR1Q7Z6L1 1165 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 PIM3Q86V86 326 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 MMP21Q8N119 569 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 ARL14EPQ8N8R7 260 aaPredicted RBP3.02□□□□□ -1.93
TRAV32-201ENST00000553993 WIPF2Q8TF74 440 aaPredicted RBP3.02□□□□□ -1.93
TRAV32-201ENST00000553993 HMGB4Q8WW32 186 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 IGFBPL1Q8WX77 278 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 PIMREGQ9BSJ6 248 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 WDR12Q9GZL7 423 aaKnown RBP3.02□□□□□ -1.93
TRAV32-201ENST00000553993 SFXN1Q9H9B4 322 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.02□□□□□ -1.93
TRAV32-201ENST00000553993 AGO2Q9UKV8 859 aaKnown RBP3.02□□□□□ -1.93
TRAV32-201ENST00000553993 ZBTB1Q9Y2K1 713 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 SQORQ9Y6N5 450 aa3.02□□□□□ -1.93
TRAV32-201ENST00000553993 TRBV5-3A0A0A0MS03 114 aa3.01□□□□□ -1.93
TRAV32-201ENST00000553993 SLC38A8A6NNN8 435 aa3.01□□□□□ -1.93
TRAV32-201ENST00000553993 EFCAB8A8MWE9 144 aa3.01□□□□□ -1.93
TRAV32-201ENST00000553993 F5H423 210 aaPredicted RBP3.01□□□□□ -1.93
TRAV32-201ENST00000553993 RHODO00212 210 aa3.01□□□□□ -1.93
TRAV32-201ENST00000553993 SYT5O00445 386 aa3.01□□□□□ -1.93
TRAV32-201ENST00000553993 ZC3H11AO75152 810 aaKnown RBP eCLIP3.01□□□□□ -1.93
TRAV32-201ENST00000553993 ACTL6BO94805 426 aa3.01□□□□□ -1.93
TRAV32-201ENST00000553993 CYP3A4P08684 503 aa3.01□□□□□ -1.93
TRAV32-201ENST00000553993 ALDOCP09972 364 aaKnown RBP3.01□□□□□ -1.93
TRAV32-201ENST00000553993 PSG1P11464 419 aa3.01□□□□□ -1.93
TRAV32-201ENST00000553993 PEPDP12955 493 aa3.01□□□□□ -1.93
TRAV32-201ENST00000553993 ALDH7A1P49419 539 aaKnown RBP3.01□□□□□ -1.93
TRAV32-201ENST00000553993 POLE2P56282 527 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms