RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 IMPG2Q9BZV3 1241 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 SIL1Q9H173 461 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 TMEM165Q9HC07 324 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 DDX21Q9NR30 783 aaKnown RBP eCLIP6.22□□□□□ -1.41
XRCC4-206ENST00000542685 IL17RBQ9NRM6 502 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 AATFQ9NY61 560 aaKnown RBP eCLIP6.22□□□□□ -1.41
XRCC4-206ENST00000542685 JKAMPQ9P055 326 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 NDUFA13Q9P0J0 144 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 HMG20BQ9P0W2 317 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 LARSQ9P2J5 1176 aaKnown RBP6.22□□□□□ -1.41
XRCC4-206ENST00000542685 CFAP45Q9UL16 551 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 SLC45A2Q9UMX9 530 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 G3BP2Q9UN86 482 aaKnown RBP6.22□□□□□ -1.41
XRCC4-206ENST00000542685 C2CD2Q9Y426 696 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 BCL9O00512 1426 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 DIP2BQ9P265 1576 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 IGSF1Q8N6C5 1336 aa6.22□□□□□ -1.41
XRCC4-206ENST00000542685 PARP4Q9UKK3 1724 aaKnown RBP6.22□□□□□ -1.41
XRCC4-206ENST00000542685 COL22A1Q8NFW1 1626 aaPredicted RBP6.21□□□□□ -1.41
XRCC4-206ENST00000542685 ABCC12Q96J65 1359 aa6.21□□□□□ -1.41
XRCC4-206ENST00000542685 LAMA4Q16363 1823 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 PRAMEF33A0A0G2JMD5 474 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 A0A1W2PS29 197 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 BICDL2A1A5D9 508 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 P4HA2O15460 535 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 SGTAO43765 313 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 PRAMEF10O60809 474 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 C1RP00736 705 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 PAEPP09466 180 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 ACADSP16219 412 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 S100A1P23297 94 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 PSMA5P28066 241 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 GJB2P29033 226 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 FOLR3P41439 243 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 ZNF131P52739 623 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 PDE1BQ01064 536 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 EIF4A2Q14240 407 aaKnown RBP6.21□□□□□ -1.42
XRCC4-206ENST00000542685 NECTIN1Q15223 517 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 CCDC153Q494R4 210 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 CFAP157Q5JU67 520 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 COLEC12Q5KU26 742 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 IRGCQ6NXR0 463 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 KLC3Q6P597 504 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 ZNF554Q86TJ5 538 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 NLRP14Q86W24 1093 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 ERICH1Q86X53 443 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 DZIP1Q86YF9 867 aaKnown RBP6.21□□□□□ -1.42
XRCC4-206ENST00000542685 SLC30A5Q8TAD4 765 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 MYCBPAPQ8TBZ2 947 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 ZNF384Q8TF68 577 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.21□□□□□ -1.42
XRCC4-206ENST00000542685 KIFAP3Q92845 792 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 CDK5RAP3Q96JB5 506 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 MRGPRX4Q96LA9 322 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 TEKT5Q96M29 485 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 ZNF570Q96NI8 536 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 NAPGQ99747 312 aaPredicted RBP6.21□□□□□ -1.42
XRCC4-206ENST00000542685 KLK15Q9H2R5 256 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 MRPL46Q9H2W6 279 aaKnown RBP6.21□□□□□ -1.42
XRCC4-206ENST00000542685 PLEKHA4Q9H4M7 779 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 SEMA4GQ9NTN9 838 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 INTS13Q9NVM9 706 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 CTTNBP2NLQ9P2B4 639 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 PDP2Q9P2J9 529 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.21□□□□□ -1.42
XRCC4-206ENST00000542685 RPL26L1Q9UNX3 145 aaKnown RBP6.21□□□□□ -1.42
XRCC4-206ENST00000542685 SSX2IPQ9Y2D8 614 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 PCDHB1Q9Y5F3 818 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 COMMD3-BMI1R4GMX3 469 aa6.21□□□□□ -1.42
XRCC4-206ENST00000542685 MED23Q9ULK4 1368 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 LSM1O15116 133 aaKnown RBP6.2□□□□□ -1.42
XRCC4-206ENST00000542685 MGEA5O60502 916 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 HSF2BPO75031 334 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 SLC43A1O75387 559 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 KATNA1O75449 491 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 PARNO95453 639 aaKnown RBP6.2□□□□□ -1.42
XRCC4-206ENST00000542685 MATN4O95460 622 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 GATA3P23771 443 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 HOXD10P28358 340 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 CDKN1CP49918 316 aaPredicted RBP6.2□□□□□ -1.42
XRCC4-206ENST00000542685 RPS7P62081 194 aaKnown RBP6.2□□□□□ -1.42
XRCC4-206ENST00000542685 KLC1Q07866 573 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 FOXD4Q12950 439 aaPredicted RBP6.2□□□□□ -1.42
XRCC4-206ENST00000542685 ITIH4Q14624 930 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 RAB39AQ14964 217 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 RCN1Q15293 331 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 UAP1L1Q3KQV9 507 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 CCDC14Q49A88 953 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 KAZNQ674X7 775 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 FAAH2Q6GMR7 532 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 GGT6Q6P531 493 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 C11orf57Q6ZUT1 292 aaPredicted RBP6.2□□□□□ -1.42
XRCC4-206ENST00000542685 PNMA8AQ86V59 439 aaPredicted RBP6.2□□□□□ -1.42
XRCC4-206ENST00000542685 VSTM4Q8IW00 320 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 CACNA2D3Q8IZS8 1091 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 CCDC63Q8NA47 563 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 SLC17A8Q8NDX2 589 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 TMIEQ8NEW7 156 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 GIMAP1Q8WWP7 306 aa6.2□□□□□ -1.42
XRCC4-206ENST00000542685 AZIN2Q96A70 460 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms