RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 TRIM73Q86UV7 250 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 DDX42Q86XP3 938 aaKnown RBP eCLIP8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 SPATA2LQ8IUW3 424 aaPredicted RBP8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 PDCL2Q8N4E4 241 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 ARL10Q8N8L6 244 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 SH3KBP1Q96B97 665 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 NACC2Q96BF6 587 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 OTUB2Q96DC9 234 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 BICD1Q96G01 975 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 NAF1Q96HR8 494 aaKnown RBP8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 FUBP3Q96I24 572 aaKnown RBP eCLIP8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 HIC2Q96JB3 615 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 ACBD6Q9BR61 282 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 TTLL2Q9BWV7 592 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 MKRN2Q9H000 416 aaKnown RBP8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 ITM2CQ9NQX7 267 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 IRAK4Q9NWZ3 460 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 DDX43Q9NXZ2 648 aaKnown RBP8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 CWC15Q9P013 229 aaKnown RBP8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 CPSF3Q9UKF6 684 aaKnown RBP8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 L1RE1Q9UN81 338 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 ANKRD6Q9Y2G4 727 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 C2CD2Q9Y426 696 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 SLC30A1Q9Y6M5 507 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 TLN1Q9Y490 2541 aaKnown RBP8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 MYH11P35749 1972 aa8.11□□□□□ -1.11
NPIPB4-215ENST00000542133 AHCTF1Q8WYP5 2266 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 E9PMD0 336 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 GFRA2O00451 464 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 HNRNPDLO14979 420 aaKnown RBP8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 HCRTO43612 131 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 CDC45O75419 566 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 MBL2P11226 248 aaPredicted RBP8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 IMPDH2P12268 514 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 GP1BBP13224 206 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 PLS3P13797 630 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 OXTRP30559 389 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 CTSKP43235 329 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 LIG4P49917 911 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 TPMTP51580 245 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 KRT83P78385 493 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 MYL7Q01449 175 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 SERINC3Q13530 473 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 TEAD4Q15561 434 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 ANO4Q32M45 955 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 BMP2KLQ5H9B9 411 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 ZC3H12BQ5HYM0 836 aaKnown RBP8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 AP1ARQ63HQ0 302 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 RINT1Q6NUQ1 792 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 IRGCQ6NXR0 463 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 DENND5BQ6ZUT9 1274 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 C1orf186Q6ZWK4 172 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 RUFY3Q7L099 469 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 OSTM1Q86WC4 334 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 BBS7Q8IWZ6 715 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 DIS3L2Q8IYB7 885 aaKnown RBP8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 ANKRD42Q8N9B4 389 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 SNX19Q92543 992 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 CNDP2Q96KP4 475 aaKnown RBP8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 SPATA17Q96L03 361 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 ZNF560Q96MR9 790 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 TMUB1Q9BVT8 246 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 PCED1AQ9H1Q7 454 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 TM9SF3Q9HD45 589 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 OSGEPQ9NPF4 335 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 SPHK2Q9NRA0 654 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 DNAJC17Q9NVM6 304 aaKnown RBP8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 DPP3Q9NY33 737 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 STIM2Q9P246 746 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 BLOC1S6Q9UL45 172 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 KIF3AQ9Y496 699 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 PCDHB6Q9Y5E3 794 aa8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 HEMK1Q9Y5R4 338 aaPredicted RBP8.1□□□□□ -1.11
NPIPB4-215ENST00000542133 CKAP5Q14008 2032 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 A0A0B4J269 797 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 A0A1B0GTQ1 180 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 WASH3PC4AMC7 463 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 LAD1O00515 517 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 CACNG3O60359 315 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 CTDNEP1O95476 244 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 LDOC1O95751 146 aaPredicted RBP8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 PIGRP01833 764 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 PPP3CCP48454 512 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 PAPOLAP51003 745 aaKnown RBP8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 SMTNP53814 917 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 NCKAP1LP55160 1127 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 TPD52P55327 224 aaPredicted RBP8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 SLC7A5Q01650 507 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 VAC14Q08AM6 782 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 NSUN2Q08J23 767 aaKnown RBP eCLIP8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 STARD3Q14849 445 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 KCNT1Q5JUK3 1230 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 CCDC122Q5T0U0 273 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 VSTM1Q6UX27 236 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 ZNF574Q6ZN55 896 aaPredicted RBP8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 CACUL1Q86Y37 369 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 TMEM25Q86YD3 366 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 GATAD2AQ86YP4 633 aa8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 RBM12BQ8IXT5 1001 aaKnown RBP8.09□□□□□ -1.11
NPIPB4-215ENST00000542133 SNX29Q8TEQ0 813 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms