RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 GP5P40197 560 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 CCDC142Q17RM4 750 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 FAM83EQ2M2I3 478 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 P2RY11Q96G91 374 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 SYBUQ9NX95 663 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 ARHGAP26Q9UNA1 814 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 ACOT9Q9Y305 439 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.5■□□□□ 0.23
VARS2-212ENST00000542001 S100BP04271 92 aaPredicted RBP16.5■□□□□ 0.23
VARS2-212ENST00000542001 TBL3Q12788 808 aaKnown RBP16.5■□□□□ 0.23
VARS2-212ENST00000542001 SNX32Q86XE0 403 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 MRPL1Q9BYD6 325 aaKnown RBP16.5■□□□□ 0.23
VARS2-212ENST00000542001 WDR55Q9H6Y2 383 aaPredicted RBP16.5■□□□□ 0.23
VARS2-212ENST00000542001 AAASQ9NRG9 546 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 RABGEF1Q9UJ41 708 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 EPHA3P29320 983 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 GLB1LQ6UWU2 654 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 MPP5Q8N3R9 675 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 PCDH20Q8N6Y1 951 aaKnown RBP16.5■□□□□ 0.23
VARS2-212ENST00000542001 PCDH19Q8TAB3 1148 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 FBXL18Q96ME1 805 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 ABHD16BQ9H3Z7 469 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 YY1AP1Q9H869 796 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 DCDC2Q9UHG0 476 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 URB1O60287 2271 aaKnown RBP16.5■□□□□ 0.23
VARS2-212ENST00000542001 PNPLA4P41247 253 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 BRCC3P46736 316 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 CYP1B1Q16678 543 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 FBXO48Q5FWF7 155 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 SNX31Q8N9S9 440 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 B3GALNT2Q8NCR0 500 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 KCNK16Q96T55 309 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 PDZD7Q9H5P4 517 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 TCF7L2Q9NQB0 619 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 CCDC167Q9P0B6 97 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 APPL1Q9UKG1 709 aa16.5■□□□□ 0.23
VARS2-212ENST00000542001 LAMB4A4D0S4 1761 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 SUPT3HB4E1H0 165 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 SUPT3HO75486 399 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 PIGNO95427 931 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 METTL18O95568 372 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 CHEK2O96017 543 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 STMN1P16949 149 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 CCR1P32246 355 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 POU5F1Q01860 360 aaKnown RBP16.49■□□□□ 0.23
VARS2-212ENST00000542001 BNIP1Q12981 228 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 MFSD10Q14728 455 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 NOMO1Q15155 1222 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 DLG2Q15700 870 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 RBBP7Q16576 425 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 RARS2Q5T160 578 aaKnown RBP16.49■□□□□ 0.23
VARS2-212ENST00000542001 SEL1L3Q68CR1 1132 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 RFWD3Q6PCD5 774 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 PIGWQ7Z7B1 504 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 C10orf107Q8IVU9 208 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 NKD2Q969F2 451 aaPredicted RBP16.49■□□□□ 0.23
VARS2-212ENST00000542001 EBNA1BP2Q99848 306 aaKnown RBP16.49■□□□□ 0.23
VARS2-212ENST00000542001 TINF2Q9BSI4 451 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 CCDC90BQ9GZT6 254 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 VPS33BQ9H267 617 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 TSPYL2Q9H2G4 693 aaPredicted RBP16.49■□□□□ 0.23
VARS2-212ENST00000542001 SNCAIPQ9Y6H5 919 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 CXorf49A8MYA2 514 aaPredicted RBP16.49■□□□□ 0.23
VARS2-212ENST00000542001 PFDN6O15212 129 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 B4GALT4O60513 344 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 MTA2O94776 668 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 CCDC138Q96M89 665 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 HAPLN2Q9GZV7 340 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 DENND2DQ9H6A0 471 aaPredicted RBP16.49■□□□□ 0.23
VARS2-212ENST00000542001 THAP1Q9NVV9 213 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 A0A0A0MRY4 1105 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 TREHO43280 583 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 CHRM3P20309 590 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 ASPAP45381 313 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 TUBP50607 506 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 PGGT1BP53609 377 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 HADHBP55084 474 aaKnown RBP16.49■□□□□ 0.23
VARS2-212ENST00000542001 AGKQ53H12 422 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 LRRC74BQ6ZQY2 392 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 GSTCDQ8NEC7 633 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 C7orf43Q8WVR3 580 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 MFSD3Q96ES6 412 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 TEPSINQ96N21 525 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 SPATA13Q96N96 652 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 CDRT15Q96T59 188 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 FRMD8Q9BZ67 464 aaPredicted RBP16.49■□□□□ 0.23
VARS2-212ENST00000542001 SDCBP2Q9H190 292 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 CAAP1Q9H8G2 361 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 GPAMQ9HCL2 828 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 MPP6Q9NZW5 540 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 SFMBT1Q9UHJ3 866 aa16.49■□□□□ 0.23
VARS2-212ENST00000542001 ADAMTSL3P82987 1691 aa16.48■□□□□ 0.23
VARS2-212ENST00000542001 A8MX80 341 aa16.48■□□□□ 0.23
VARS2-212ENST00000542001 MFSD11O43934 449 aa16.48■□□□□ 0.23
VARS2-212ENST00000542001 HNRNPCL1O60812 293 aaKnown RBP16.48■□□□□ 0.23
VARS2-212ENST00000542001 LTFP02788 710 aa16.48■□□□□ 0.23
VARS2-212ENST00000542001 SETSIPP0DME0 302 aa16.48■□□□□ 0.23
VARS2-212ENST00000542001 RNF43Q68DV7 783 aa16.48■□□□□ 0.23
VARS2-212ENST00000542001 TMPRSS6Q8IU80 811 aa16.48■□□□□ 0.23
VARS2-212ENST00000542001 CSPG4P5Q96PW8 444 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms