RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 OR12D3Q9UGF7 316 aa19.34■□□□□ 0.69
PTPRK-218ENST00000525459 TFR2Q9UP52 801 aa19.34■□□□□ 0.69
PTPRK-218ENST00000525459 A0A1B0GVM2 712 aa19.33■□□□□ 0.68
PTPRK-218ENST00000525459 TCAF2A6NFQ2 919 aa19.33■□□□□ 0.68
PTPRK-218ENST00000525459 SPECC1L-ADORA2AF8WAN1 911 aa19.33■□□□□ 0.68
PTPRK-218ENST00000525459 I6L893 689 aaPredicted RBP19.33■□□□□ 0.68
PTPRK-218ENST00000525459 BUB1BO60566 1050 aaPredicted RBP19.33■□□□□ 0.68
PTPRK-218ENST00000525459 TYRP14679 529 aa19.33■□□□□ 0.68
PTPRK-218ENST00000525459 L1CAMP32004 1257 aa19.33■□□□□ 0.68
PTPRK-218ENST00000525459 CTHP32929 405 aa19.33■□□□□ 0.68
PTPRK-218ENST00000525459 VCPP55072 806 aaKnown RBP19.33■□□□□ 0.68
PTPRK-218ENST00000525459 SLC44A4Q53GD3 710 aa19.33■□□□□ 0.68
PTPRK-218ENST00000525459 RNF43Q68DV7 783 aa19.33■□□□□ 0.68
PTPRK-218ENST00000525459 DAAM2Q86T65 1068 aa19.33■□□□□ 0.68
PTPRK-218ENST00000525459 EDAQ92838 391 aa19.33■□□□□ 0.68
PTPRK-218ENST00000525459 PRICKLE1Q96MT3 831 aaPredicted RBP19.33■□□□□ 0.68
PTPRK-218ENST00000525459 RPRD1AQ96P16 312 aaPredicted RBP19.33■□□□□ 0.68
PTPRK-218ENST00000525459 PPARGC1AQ9UBK2 798 aaKnown RBP19.33■□□□□ 0.68
PTPRK-218ENST00000525459 PCSK1NQ9UHG2 260 aa19.33■□□□□ 0.68
PTPRK-218ENST00000525459 IGLV3-10A0A075B6K4 115 aa19.32■□□□□ 0.68
PTPRK-218ENST00000525459 TMEM110-MUSTN1A8MSY1 372 aa19.32■□□□□ 0.68
PTPRK-218ENST00000525459 SPOPO43791 374 aa19.32■□□□□ 0.68
PTPRK-218ENST00000525459 SSR1P43307 286 aaKnown RBP19.32■□□□□ 0.68
PTPRK-218ENST00000525459 LRRC38Q5VT99 294 aa19.32■□□□□ 0.68
PTPRK-218ENST00000525459 FBXL22Q6P050 247 aa19.32■□□□□ 0.68
PTPRK-218ENST00000525459 RFWD3Q6PCD5 774 aa19.32■□□□□ 0.68
PTPRK-218ENST00000525459 CHST9Q7L1S5 443 aa19.32■□□□□ 0.68
PTPRK-218ENST00000525459 PEBP4Q96S96 227 aa19.32■□□□□ 0.68
PTPRK-218ENST00000525459 DONSONQ9NYP3 566 aa19.32■□□□□ 0.68
PTPRK-218ENST00000525459 VANGL2Q9ULK5 521 aa19.32■□□□□ 0.68
PTPRK-218ENST00000525459 MRPS17Q9Y2R5 130 aaKnown RBP19.32■□□□□ 0.68
PTPRK-218ENST00000525459 CHD5Q8TDI0 1954 aa19.32■□□□□ 0.68
PTPRK-218ENST00000525459 GOLGA6L7A0A1B0GV03 622 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 MACROD2A1Z1Q3 448 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 OTOL1A6NHN0 477 aaPredicted RBP19.31■□□□□ 0.68
PTPRK-218ENST00000525459 E9PAM4 449 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 BUB1O43683 1085 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 HOXD9P28356 352 aaPredicted RBP19.31■□□□□ 0.68
PTPRK-218ENST00000525459 DPYSL2Q16555 572 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 MANEALQ5VSG8 457 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 TPRG1Q6ZUI0 275 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 NUDT18Q6ZVK8 323 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 CYP4V2Q6ZWL3 525 aaPredicted RBP19.31■□□□□ 0.68
PTPRK-218ENST00000525459 RHOT1Q8IXI2 618 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 ETFBKMTQ8IXQ9 262 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 SALL4Q9UJQ4 1053 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 DUSP10Q9Y6W6 482 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 BDP1A6H8Y1 2624 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 TTC28Q96AY4 2481 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 PSTPIP1O43586 416 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 TSPAN3O60637 253 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 CLDN11O75508 207 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 OXCT1P55809 520 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 SEMA3BQ13214 749 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 KIAA1524Q8TCG1 905 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 TBC1D31Q96DN5 1066 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 ALS2CR12Q96Q35 445 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 ZYG11BQ9C0D3 744 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 DHX35Q9H5Z1 703 aaKnown RBP19.31■□□□□ 0.68
PTPRK-218ENST00000525459 RCOR3Q9P2K3 495 aaPredicted RBP19.31■□□□□ 0.68
PTPRK-218ENST00000525459 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.31■□□□□ 0.68
PTPRK-218ENST00000525459 ALG6Q9Y672 507 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 F5P12259 2224 aa19.31■□□□□ 0.68
PTPRK-218ENST00000525459 GOLGA6L9A6NEM1 432 aa19.3■□□□□ 0.68
PTPRK-218ENST00000525459 DRGXA6NNA5 263 aa19.3■□□□□ 0.68
PTPRK-218ENST00000525459 FGF10O15520 208 aaPredicted RBP19.3■□□□□ 0.68
PTPRK-218ENST00000525459 TBL1XO60907 577 aa19.3■□□□□ 0.68
PTPRK-218ENST00000525459 HOXC13P31276 330 aa19.3■□□□□ 0.68
PTPRK-218ENST00000525459 CDH4P55283 916 aa19.3■□□□□ 0.68
PTPRK-218ENST00000525459 STARD6P59095 220 aa19.3■□□□□ 0.68
PTPRK-218ENST00000525459 CDH18Q13634 790 aa19.3■□□□□ 0.68
PTPRK-218ENST00000525459 GAB4Q2WGN9 574 aa19.3■□□□□ 0.68
PTPRK-218ENST00000525459 ZNF852Q6ZMS4 543 aa19.3■□□□□ 0.68
PTPRK-218ENST00000525459 MFN1Q8IWA4 741 aa19.3■□□□□ 0.68
PTPRK-218ENST00000525459 ZNF683Q8IZ20 524 aa19.3■□□□□ 0.68
PTPRK-218ENST00000525459 CD101Q93033 1021 aa19.3■□□□□ 0.68
PTPRK-218ENST00000525459 ZNF830Q96NB3 372 aaPredicted RBP19.3■□□□□ 0.68
PTPRK-218ENST00000525459 NELL2Q99435 816 aa19.3■□□□□ 0.68
PTPRK-218ENST00000525459 ZWILCHQ9H900 591 aa19.3■□□□□ 0.68
PTPRK-218ENST00000525459 TMPRSS4Q9NRS4 437 aa19.3■□□□□ 0.68
PTPRK-218ENST00000525459 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.3■□□□□ 0.68
PTPRK-218ENST00000525459 DDX56Q9NY93 547 aaKnown RBP19.3■□□□□ 0.68
PTPRK-218ENST00000525459 DEC1Q9P2X7 70 aa19.3■□□□□ 0.68
PTPRK-218ENST00000525459 CA14Q9ULX7 337 aa19.3■□□□□ 0.68
PTPRK-218ENST00000525459 GUCA1BQ9UMX6 200 aa19.3■□□□□ 0.68
PTPRK-218ENST00000525459 TRDMT1O14717 391 aaKnown RBP19.29■□□□□ 0.68
PTPRK-218ENST00000525459 LRIG2O94898 1065 aa19.29■□□□□ 0.68
PTPRK-218ENST00000525459 LUC7L3O95232 432 aaKnown RBP19.29■□□□□ 0.68
PTPRK-218ENST00000525459 RARAP10276 462 aa19.29■□□□□ 0.68
PTPRK-218ENST00000525459 COMTP21964 271 aa19.29■□□□□ 0.68
PTPRK-218ENST00000525459 IL1R2P27930 398 aa19.29■□□□□ 0.68
PTPRK-218ENST00000525459 ARL4AP40617 200 aa19.29■□□□□ 0.68
PTPRK-218ENST00000525459 PDK2Q15119 407 aa19.29■□□□□ 0.68
PTPRK-218ENST00000525459 DAB2IPQ5VWQ8 1189 aa19.29■□□□□ 0.68
PTPRK-218ENST00000525459 VSIG1Q86XK7 387 aa19.29■□□□□ 0.68
PTPRK-218ENST00000525459 MAP7D3Q8IWC1 876 aa19.29■□□□□ 0.68
PTPRK-218ENST00000525459 CCDC26Q8TAB7 109 aa19.29■□□□□ 0.68
PTPRK-218ENST00000525459 P2RY13Q9BPV8 354 aa19.29■□□□□ 0.68
PTPRK-218ENST00000525459 CATSPERBQ9H7T0 1116 aa19.29■□□□□ 0.68
PTPRK-218ENST00000525459 DNAJC17Q9NVM6 304 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms