RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 INVSQ9Y283 1065 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 RGS10O43665 173 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 PHKG2P15735 406 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 FXR1P51114 621 aaKnown RBP eCLIP13.96□□□□□ -0.17
LRRK1-202ENST00000525284 CCZ1BP86790 482 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 CCZ1P86791 482 aaPredicted RBP13.96□□□□□ -0.17
LRRK1-202ENST00000525284 ITGA9Q13797 1035 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 SV2CQ496J9 727 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 TTC27Q6P3X3 843 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 PYDC1Q8WXC3 89 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 NEK6Q9HC98 313 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 ABI2Q9NYB9 513 aaPredicted RBP13.96□□□□□ -0.17
LRRK1-202ENST00000525284 C15orf41Q9Y2V0 281 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 TDRD10Q5VZ19 366 aaKnown RBP13.96□□□□□ -0.17
LRRK1-202ENST00000525284 TRMT11Q7Z4G4 463 aaKnown RBP13.96□□□□□ -0.17
LRRK1-202ENST00000525284 SLC22A9Q8IVM8 553 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 ZHX1-C8orf76Q96EF9 292 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 FRMD8Q9BZ67 464 aaPredicted RBP13.96□□□□□ -0.17
LRRK1-202ENST00000525284 JPH1Q9HDC5 661 aaPredicted RBP13.96□□□□□ -0.17
LRRK1-202ENST00000525284 CLN6Q9NWW5 311 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 CCDC167Q9P0B6 97 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 OGDHLQ9ULD0 1010 aa13.96□□□□□ -0.17
LRRK1-202ENST00000525284 HLA-DRAP01903 254 aa13.96□□□□□ -0.18
LRRK1-202ENST00000525284 TMEM253P0C7T8 217 aa13.96□□□□□ -0.18
LRRK1-202ENST00000525284 GJA8P48165 433 aa13.96□□□□□ -0.18
LRRK1-202ENST00000525284 NECTIN1Q15223 517 aa13.96□□□□□ -0.18
LRRK1-202ENST00000525284 ZSWIM2Q8NEG5 633 aa13.96□□□□□ -0.18
LRRK1-202ENST00000525284 OR52L1Q8NGH7 329 aa13.96□□□□□ -0.18
LRRK1-202ENST00000525284 LRRC40Q9H9A6 602 aa13.96□□□□□ -0.18
LRRK1-202ENST00000525284 DDIT4Q9NX09 232 aa13.96□□□□□ -0.18
LRRK1-202ENST00000525284 TUBA8Q9NY65 449 aaPredicted RBP13.96□□□□□ -0.18
LRRK1-202ENST00000525284 XPR1Q9UBH6 696 aa13.96□□□□□ -0.18
LRRK1-202ENST00000525284 IFRD1O00458 451 aaPredicted RBP13.96□□□□□ -0.18
LRRK1-202ENST00000525284 MSH4O15457 936 aa13.96□□□□□ -0.18
LRRK1-202ENST00000525284 BBOX1O75936 387 aa13.96□□□□□ -0.18
LRRK1-202ENST00000525284 RB1P06400 928 aa13.96□□□□□ -0.18
LRRK1-202ENST00000525284 AP1S1P61966 158 aa13.96□□□□□ -0.18
LRRK1-202ENST00000525284 KCNB1Q14721 858 aa13.96□□□□□ -0.18
LRRK1-202ENST00000525284 ARHGAP15Q53QZ3 475 aa13.96□□□□□ -0.18
LRRK1-202ENST00000525284 BHLHE22Q8NFJ8 381 aaPredicted RBP13.96□□□□□ -0.18
LRRK1-202ENST00000525284 DNAJC1Q96KC8 554 aaKnown RBP13.96□□□□□ -0.18
LRRK1-202ENST00000525284 SLITRK1Q96PX8 696 aa13.96□□□□□ -0.18
LRRK1-202ENST00000525284 MARCH7Q9H992 704 aa13.96□□□□□ -0.18
LRRK1-202ENST00000525284 FBXO28Q9NVF7 368 aa13.96□□□□□ -0.18
LRRK1-202ENST00000525284 PLEKHG1Q9ULL1 1385 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 STK36Q9NRP7 1315 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 FAM172BPA6NC97 362 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 MDM4O15151 490 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 PTGS2P35354 604 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 GPR15P49685 360 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 MAD2L1Q13257 205 aaPredicted RBP13.95□□□□□ -0.18
LRRK1-202ENST00000525284 PKN1Q16512 942 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 AMHR2Q16671 573 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 CXXC5Q7LFL8 322 aaKnown RBP13.95□□□□□ -0.18
LRRK1-202ENST00000525284 RD3Q7Z3Z2 195 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 EMC1Q8N766 993 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 ZNF540Q8NDQ6 660 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 ORAI2Q96SN7 254 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 MID1IP1Q9NPA3 183 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 CBFA2T3O75081 653 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 RPS6KA5O75582 802 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 CD4P01730 458 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 ITGA4P13612 1032 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 PKNOX1P55347 436 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 VBP1P61758 197 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 EPHA7Q15375 998 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 RBM43Q6ZSC3 357 aaKnown RBP13.95□□□□□ -0.18
LRRK1-202ENST00000525284 GIPC3Q8TF64 312 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 TRNT1Q96Q11 434 aaKnown RBP13.95□□□□□ -0.18
LRRK1-202ENST00000525284 PLGRKTQ9HBL7 147 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 BARHL2Q9NY43 387 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 GRIP1Q9Y3R0 1128 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 SH3D21A4FU49 640 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 TXNP10599 105 aaKnown RBP13.95□□□□□ -0.18
LRRK1-202ENST00000525284 SLC11A2P49281 568 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 MRPS22P82650 360 aaKnown RBP13.95□□□□□ -0.18
LRRK1-202ENST00000525284 QRICH1Q2TAL8 776 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 GJB7Q6PEY0 223 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 BHLHB9Q6PI77 547 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 CYP20A1Q6UW02 462 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 GALNTL5Q7Z4T8 443 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 TRMT2AQ8IZ69 625 aaKnown RBP13.95□□□□□ -0.18
LRRK1-202ENST00000525284 SLC44A5Q8NCS7 719 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 IL17REQ8NFR9 667 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 ANKRD7Q92527 254 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 VPS35Q96QK1 796 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.95□□□□□ -0.18
LRRK1-202ENST00000525284 ZMYND11Q15326 602 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 RAD9BQ6WBX8 426 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 EHD1Q9H4M9 534 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 SNX6Q9UNH7 406 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 A0A1B0GTH6 734 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 ME2P23368 584 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 FMR1Q06787 632 aaKnown RBP eCLIP13.95□□□□□ -0.18
LRRK1-202ENST00000525284 FAM210AQ96ND0 272 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 ARMCX1Q9P291 453 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 PCDHB2Q9Y5E7 798 aa13.95□□□□□ -0.18
LRRK1-202ENST00000525284 F5H5T6 163 aa13.94□□□□□ -0.18
LRRK1-202ENST00000525284 CYP2E1P05181 493 aaPredicted RBP13.94□□□□□ -0.18
LRRK1-202ENST00000525284 KCNA6P17658 529 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms