RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 IMPG2Q9BZV3 1241 aa21.18■□□□□ 0.98
SQSTM1-215ENST00000514093 NIF3L1Q9GZT8 377 aa21.18■□□□□ 0.98
SQSTM1-215ENST00000514093 RSPH9Q9H1X1 276 aaPredicted RBP21.18■□□□□ 0.98
SQSTM1-215ENST00000514093 NEUROG2Q9H2A3 272 aa21.18■□□□□ 0.98
SQSTM1-215ENST00000514093 MMRN2Q9H8L6 949 aa21.18■□□□□ 0.98
SQSTM1-215ENST00000514093 FOXD4L1Q9NU39 408 aa21.18■□□□□ 0.98
SQSTM1-215ENST00000514093 TEX51A0A1B0GUA7 166 aa21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 A0A1W2PP55 124 aa21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 ATP5BP06576 529 aaKnown RBP21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 TRIM49P0CI25 452 aa21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 TRIM49CP0CI26 452 aa21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 CDK4P11802 303 aa21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 POLR2EP19388 210 aaKnown RBP21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 CD38P28907 300 aa21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 PDE4CQ08493 712 aa21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 KCNJ12Q14500 433 aa21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 RAB41Q5JT25 222 aa21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 TSC1Q92574 1164 aa21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 EDEM1Q92611 657 aa21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 SKA1Q96BD8 255 aa21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 TMEM176AQ96HP8 235 aa21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 ULBP1Q9BZM6 244 aa21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 KCTD10Q9H3F6 313 aa21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 ZSCAN16Q9H4T2 348 aaPredicted RBP21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 MAGEF1Q9HAY2 307 aa21.17■□□□□ 0.98
SQSTM1-215ENST00000514093 GOLGA6L7A0A1B0GV03 622 aa21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 TULP2O00295 520 aa21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 MID1O15344 667 aa21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 CUTAO60888 179 aa21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 SIN3BO75182 1162 aa21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 RNASEH2AO75792 299 aaKnown RBP21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 ZBED1O96006 694 aa21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 EPHA8P29322 1005 aaPredicted RBP21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 VAMP7P51809 220 aa21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 TLE3Q04726 772 aa21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 PPP3CAQ08209 521 aa21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 ADGRF1Q5T601 910 aa21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 RFWD3Q6PCD5 774 aa21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 USP30Q70CQ3 517 aa21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 BHLHA9Q7RTU4 235 aa21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 DHX40Q8IX18 779 aaKnown RBP21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 UBXN6Q9BZV1 441 aa21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 GDF3Q9NR23 364 aa21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 FRMD4BQ9Y2L6 1034 aa21.16■□□□□ 0.98
SQSTM1-215ENST00000514093 MGAQ8IWI9 3026 aa21.15■□□□□ 0.98
SQSTM1-215ENST00000514093 A0A1W2PR77 199 aa21.15■□□□□ 0.98
SQSTM1-215ENST00000514093 J3QKU1 62 aa21.15■□□□□ 0.98
SQSTM1-215ENST00000514093 MSI1O43347 362 aaKnown RBP21.15■□□□□ 0.98
SQSTM1-215ENST00000514093 KLRC4O43908 158 aa21.15■□□□□ 0.98
SQSTM1-215ENST00000514093 TBL1XO60907 577 aa21.15■□□□□ 0.98
SQSTM1-215ENST00000514093 ERICH6BQ5W0A0 696 aa21.15■□□□□ 0.98
SQSTM1-215ENST00000514093 PM20D1Q6GTS8 502 aa21.15■□□□□ 0.98
SQSTM1-215ENST00000514093 SPACA3Q8IXA5 215 aa21.15■□□□□ 0.98
SQSTM1-215ENST00000514093 MYO19Q96H55 970 aa21.15■□□□□ 0.98
SQSTM1-215ENST00000514093 STIM2Q9P246 746 aa21.15■□□□□ 0.98
SQSTM1-215ENST00000514093 STOML2Q9UJZ1 356 aa21.15■□□□□ 0.98
SQSTM1-215ENST00000514093 LRRC72A6NJI9 287 aa21.14■□□□□ 0.97
SQSTM1-215ENST00000514093 PDIA4P13667 645 aaKnown RBP21.14■□□□□ 0.97
SQSTM1-215ENST00000514093 GLDCP23378 1020 aa21.14■□□□□ 0.97
SQSTM1-215ENST00000514093 CST6Q15828 149 aa21.14■□□□□ 0.97
SQSTM1-215ENST00000514093 MMAAQ8IVH4 418 aaKnown RBP21.14■□□□□ 0.97
SQSTM1-215ENST00000514093 SLC4A11Q8NBS3 891 aa21.14■□□□□ 0.97
SQSTM1-215ENST00000514093 RNF139Q8WU17 664 aa21.14■□□□□ 0.97
SQSTM1-215ENST00000514093 TMEM174Q8WUU8 243 aa21.14■□□□□ 0.97
SQSTM1-215ENST00000514093 NAF1Q96HR8 494 aaKnown RBP21.14■□□□□ 0.97
SQSTM1-215ENST00000514093 SERAC1Q96JX3 654 aa21.14■□□□□ 0.97
SQSTM1-215ENST00000514093 OMDQ99983 421 aa21.14■□□□□ 0.97
SQSTM1-215ENST00000514093 DNAI2Q9GZS0 605 aa21.14■□□□□ 0.97
SQSTM1-215ENST00000514093 UPF2Q9HAU5 1272 aaKnown RBP21.14■□□□□ 0.97
SQSTM1-215ENST00000514093 OLA1Q9NTK5 396 aaKnown RBP21.14■□□□□ 0.97
SQSTM1-215ENST00000514093 SCML1Q9UN30 329 aa21.14■□□□□ 0.97
SQSTM1-215ENST00000514093 HBS1LQ9Y450 684 aaKnown RBP21.14■□□□□ 0.97
SQSTM1-215ENST00000514093 PDXKO00764 312 aa21.13■□□□□ 0.97
SQSTM1-215ENST00000514093 RNASEH1O60930 286 aaKnown RBP21.13■□□□□ 0.97
SQSTM1-215ENST00000514093 ACTN2P35609 894 aa21.13■□□□□ 0.97
SQSTM1-215ENST00000514093 ARRB1P49407 418 aaPredicted RBP21.13■□□□□ 0.97
SQSTM1-215ENST00000514093 RAD23BP54727 409 aa21.13■□□□□ 0.97
SQSTM1-215ENST00000514093 ZNF445P59923 1031 aa21.13■□□□□ 0.97
SQSTM1-215ENST00000514093 TAF1BQ53T94 588 aaPredicted RBP21.13■□□□□ 0.97
SQSTM1-215ENST00000514093 ERICH1Q86X53 443 aa21.13■□□□□ 0.97
SQSTM1-215ENST00000514093 ANKRD52Q8NB46 1076 aa21.13■□□□□ 0.97
SQSTM1-215ENST00000514093 OR2T34Q8NGX1 318 aa21.13■□□□□ 0.97
SQSTM1-215ENST00000514093 EXOC1Q9NV70 894 aa21.13■□□□□ 0.97
SQSTM1-215ENST00000514093 CLCA2Q9UQC9 943 aa21.13■□□□□ 0.97
SQSTM1-215ENST00000514093 PYCARD-AS1I3L0S3 204 aa21.12■□□□□ 0.97
SQSTM1-215ENST00000514093 TLR4O00206 839 aa21.12■□□□□ 0.97
SQSTM1-215ENST00000514093 YKT6O15498 198 aa21.12■□□□□ 0.97
SQSTM1-215ENST00000514093 SLFN14P0C7P3 912 aa21.12■□□□□ 0.97
SQSTM1-215ENST00000514093 CKMT2P17540 419 aa21.12■□□□□ 0.97
SQSTM1-215ENST00000514093 SLC6A4P31645 630 aa21.12■□□□□ 0.97
SQSTM1-215ENST00000514093 SLC8A1P32418 973 aa21.12■□□□□ 0.97
SQSTM1-215ENST00000514093 NXPH1P58417 271 aa21.12■□□□□ 0.97
SQSTM1-215ENST00000514093 ST8SIA6P61647 398 aa21.12■□□□□ 0.97
SQSTM1-215ENST00000514093 INSM1Q01101 510 aaPredicted RBP21.12■□□□□ 0.97
SQSTM1-215ENST00000514093 KCNH2Q12809 1159 aa21.12■□□□□ 0.97
SQSTM1-215ENST00000514093 HNRNPA1L2Q32P51 320 aaKnown RBP21.12■□□□□ 0.97
SQSTM1-215ENST00000514093 TBC1D25Q3MII6 688 aa21.12■□□□□ 0.97
SQSTM1-215ENST00000514093 FOXD4L6Q3SYB3 417 aaPredicted RBP21.12■□□□□ 0.97
SQSTM1-215ENST00000514093 KMT5BQ4FZB7 885 aa21.12■□□□□ 0.97
SQSTM1-215ENST00000514093 PIK3R6Q5UE93 754 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms