RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 GABREP78334 506 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 MTAPQ13126 283 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 PLCB4Q15147 1175 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 TCEA2Q15560 299 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 TMEM266Q2M3C6 531 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 SOWAHCQ53LP3 525 aaPredicted RBP4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 TM4SF20Q53R12 229 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 RRP12Q5JTH9 1297 aaKnown RBP4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 STPG1Q5TH74 334 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 ABHD17BQ5VST6 288 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 C1orf228Q6PIY5 440 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 RTL10Q7L3V2 364 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 LONP2Q86WA8 852 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 ECHDC2Q86YB7 292 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 OR52N2Q8NGI0 321 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 WDR92Q96MX6 357 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 NDC1Q9BTX1 674 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 MRPL4Q9BYD3 311 aaKnown RBP4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 ENKD1Q9H0I2 346 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 NT5C3AQ9H0P0 336 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 CPVLQ9H3G5 476 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 KAT14Q9H8E8 782 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 HELLSQ9NRZ9 838 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 ZDHHC7Q9NXF8 308 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 KCMF1Q9P0J7 381 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 SFMBT1Q9UHJ3 866 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 MRPS23Q9Y3D9 190 aaKnown RBP4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 MTF2Q9Y483 593 aaPredicted RBP4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 PCDHA8Q9Y5H6 950 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 NUMBLQ9Y6R0 609 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 FRYQ5TBA9 3013 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 ZMYM6O95789 1325 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 TTC41PQ6P2S7 1318 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 COL1A2P08123 1366 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 SPEGQ15772 3267 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 IGF2RP11717 2491 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 EVPLQ92817 2033 aa4.11□□□□□ -1.75
PDLIM5-218ENST00000513341 LAMA4Q16363 1823 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 IGKV6D-21A0A0A0MT36 114 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 KLRF2D3W0D1 207 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 INPPL1O15357 1258 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 MAGEB2O15479 319 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 CDC45O75419 566 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 ESRRBO95718 433 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 GLUD1P00367 558 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 CSRP1P21291 193 aaKnown RBP4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 HSD3B2P26439 372 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 MARK3P27448 753 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 TMOD1P28289 359 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 PBX3P40426 434 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 GUCY1A3Q02108 690 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 SP4Q02446 784 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 BEAN1Q3B7T3 259 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 AASDHQ4L235 1098 aaPredicted RBP4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 CLLU1OSQ5K130 101 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 CATSPEREQ5SY80 951 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 TSSK4Q6SA08 328 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 PARM1Q6UWI2 310 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 BRAPQ7Z569 592 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 JAZF1Q86VZ6 243 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 FAM228AQ86W67 206 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 SPEM1Q8N4L4 309 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 LILRA3Q8N6C8 439 aaPredicted RBP4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 ZNF366Q8N895 744 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 GLB1L3Q8NCI6 653 aaPredicted RBP4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 AUTS2Q8WXX7 1259 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 DNASE1L2Q92874 299 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 FGF14Q92915 247 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 CUL5Q93034 780 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 CAVIN3Q969G5 261 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 ZNF707Q96C28 371 aaPredicted RBP4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 RPS6KC1Q96S38 1066 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 PCYT2Q99447 389 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 TMEM175Q9BSA9 504 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 RPP25Q9BUL9 199 aaKnown RBP4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 TRPV5Q9NQA5 729 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 KMT5AQ9NQR1 393 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 MAN1C1Q9NR34 630 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 ZBTB40Q9NUA8 1239 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 FNIP2Q9P278 1114 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 RNF7Q9UBF6 113 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 SLC9A2Q9UBY0 812 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 EIF2B4Q9UI10 523 aaKnown RBP4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 CDH7Q9ULB5 785 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 GINS2Q9Y248 185 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 CHST2Q9Y4C5 530 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 NEUROG3Q9Y4Z2 214 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 PCDHGA5Q9Y5G8 931 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 MYH15Q9Y2K3 1946 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 NFASCO94856 1347 aa4.1□□□□□ -1.75
PDLIM5-218ENST00000513341 LAMA5O15230 3695 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 SMG1Q96Q15 3661 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 EIF4E1BA6NMX2 242 aaKnown RBP4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 DIRC3C9JPN6 131 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 H0Y626 953 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 SCDO00767 359 aa4.09□□□□□ -1.75
PDLIM5-218ENST00000513341 KCNK3O14649 394 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms