RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 ANKRD52Q8NB46 1076 aa17.14■□□□□ 0.33
SNF8-205ENST00000507302 SLC4A11Q8NBS3 891 aa17.14■□□□□ 0.33
SNF8-205ENST00000507302 WFDC5Q8TCV5 224 aa17.14■□□□□ 0.33
SNF8-205ENST00000507302 TTC17Q96AE7 1141 aa17.14■□□□□ 0.33
SNF8-205ENST00000507302 TMA16Q96EY4 203 aaKnown RBP17.14■□□□□ 0.33
SNF8-205ENST00000507302 CNDP2Q96KP4 475 aaKnown RBP17.14■□□□□ 0.33
SNF8-205ENST00000507302 SLC6A18Q96N87 628 aa17.14■□□□□ 0.33
SNF8-205ENST00000507302 IMPG2Q9BZV3 1241 aa17.14■□□□□ 0.33
SNF8-205ENST00000507302 OLA1Q9NTK5 396 aaKnown RBP17.14■□□□□ 0.33
SNF8-205ENST00000507302 CBX4O00257 560 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 ZBED1O96006 694 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 IGLV3-27P01718 113 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 ATP5BP06576 529 aaKnown RBP17.13■□□□□ 0.33
SNF8-205ENST00000507302 RXRGP48443 463 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 HARS2P49590 506 aaKnown RBP17.13■□□□□ 0.33
SNF8-205ENST00000507302 CCR5P51681 352 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 VAMP7P51809 220 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 RAD23BP54727 409 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 CLDN6P56747 220 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 C21orf59P57076 290 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 TARDBPQ13148 414 aaKnown RBP eCLIP17.13■□□□□ 0.33
SNF8-205ENST00000507302 DNAJC3Q13217 504 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 RESP18Q5W5W9 173 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 LRRC69Q6ZNQ3 347 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 RSRC2Q7L4I2 434 aaKnown RBP17.13■□□□□ 0.33
SNF8-205ENST00000507302 FMNL3Q8IVF7 1028 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 SCML4Q8N228 414 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 TTC39CQ8N584 583 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 KDM1BQ8NB78 822 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 FCRL3Q96P31 734 aaPredicted RBP17.13■□□□□ 0.33
SNF8-205ENST00000507302 DNAI2Q9GZS0 605 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 ERVMER34-1Q9H9K5 563 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 SERGEFQ9UGK8 458 aa17.13■□□□□ 0.33
SNF8-205ENST00000507302 RRP8O43159 456 aaKnown RBP17.12■□□□□ 0.33
SNF8-205ENST00000507302 CD58P19256 250 aa17.12■□□□□ 0.33
SNF8-205ENST00000507302 EPHA8P29322 1005 aaPredicted RBP17.12■□□□□ 0.33
SNF8-205ENST00000507302 CD70P32970 193 aa17.12■□□□□ 0.33
SNF8-205ENST00000507302 AFMP43652 599 aa17.12■□□□□ 0.33
SNF8-205ENST00000507302 SGSHP51688 502 aa17.12■□□□□ 0.33
SNF8-205ENST00000507302 TKTL1P51854 596 aa17.12■□□□□ 0.33
SNF8-205ENST00000507302 HNRNPA1L2Q32P51 320 aaKnown RBP17.12■□□□□ 0.33
SNF8-205ENST00000507302 CCDC157Q569K6 752 aa17.12■□□□□ 0.33
SNF8-205ENST00000507302 HES3Q5TGS1 186 aa17.12■□□□□ 0.33
SNF8-205ENST00000507302 ADAT2Q7Z6V5 191 aaKnown RBP17.12■□□□□ 0.33
SNF8-205ENST00000507302 MRGPRX3Q96LB0 322 aa17.12■□□□□ 0.33
SNF8-205ENST00000507302 ULBP1Q9BZM6 244 aa17.12■□□□□ 0.33
SNF8-205ENST00000507302 FZD4Q9ULV1 537 aa17.12■□□□□ 0.33
SNF8-205ENST00000507302 TPX2Q9ULW0 747 aaKnown RBP17.12■□□□□ 0.33
SNF8-205ENST00000507302 NCKAP1Q9Y2A7 1128 aa17.12■□□□□ 0.33
SNF8-205ENST00000507302 FRMD4BQ9Y2L6 1034 aa17.12■□□□□ 0.33
SNF8-205ENST00000507302 WNT9AO14904 365 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 KIF20AO95235 890 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 CD38P28907 300 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 GCLMP48507 274 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 SEMG2Q02383 582 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 TLE3Q04726 772 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 FAM133BQ5BKY9 247 aaKnown RBP17.11■□□□□ 0.33
SNF8-205ENST00000507302 PRAMEF14Q5SWL7 426 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 PIK3R6Q5UE93 754 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 MSANTD2Q6P1R3 559 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 NCEH1Q6PIU2 408 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 INTS8Q75QN2 995 aaKnown RBP17.11■□□□□ 0.33
SNF8-205ENST00000507302 GPR155Q7Z3F1 870 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 GRAMD1CQ8IYS0 662 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 DCBLD1Q8N8Z6 715 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 ZNF557Q8N988 423 aaPredicted RBP17.11■□□□□ 0.33
SNF8-205ENST00000507302 OR2T34Q8NGX1 318 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 BAP1Q92560 729 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 FGF11Q92914 225 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 AZIN2Q96A70 460 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 FAM131CQ96AQ9 280 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 SKA1Q96BD8 255 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 TMEM176AQ96HP8 235 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 HEXIM2Q96MH2 286 aaKnown RBP17.11■□□□□ 0.33
SNF8-205ENST00000507302 ZNF396Q96N95 335 aaPredicted RBP17.11■□□□□ 0.33
SNF8-205ENST00000507302 UPF2Q9HAU5 1272 aaKnown RBP17.11■□□□□ 0.33
SNF8-205ENST00000507302 FBXL12Q9NXK8 326 aa17.11■□□□□ 0.33
SNF8-205ENST00000507302 TULP2O00295 520 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 XPO1O14980 1071 aaKnown RBP17.1■□□□□ 0.33
SNF8-205ENST00000507302 IRAK2O43187 625 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 LATO43561 262 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 ACTN4O43707 911 aaKnown RBP17.1■□□□□ 0.33
SNF8-205ENST00000507302 ITGAVP06756 1048 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 TRIM49P0CI25 452 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 TRIM49CP0CI26 452 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 POLR2EP19388 210 aaKnown RBP17.1■□□□□ 0.33
SNF8-205ENST00000507302 GTF2H1P32780 548 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 NXPH1P58417 271 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 SFSWAPQ12872 951 aaKnown RBP17.1■□□□□ 0.33
SNF8-205ENST00000507302 CST6Q15828 149 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 KMT5BQ4FZB7 885 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 ZNF394Q53GI3 561 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 C9orf64Q5T6V5 341 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 BSPRYQ5W0U4 402 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 CEP135Q66GS9 1140 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 ZNF605Q86T29 641 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 ERICH1Q86X53 443 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 FIBINQ8TAL6 211 aa17.1■□□□□ 0.33
SNF8-205ENST00000507302 NDRG1Q92597 394 aaKnown RBP17.1■□□□□ 0.33
SNF8-205ENST00000507302 WBP1Q96G27 269 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms