RNA–Protein interactions for RNA: ENST00000490723.1

PHC3-212, Transcript of polyhomeotic homolog 3, human

TSL 2

Gene PHC3, Length 264 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHC3-212	ENST00000490723	SHC2	P98077	582 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	B4GALNT1	Q00973	533 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	SPARCL1	Q14515	664 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	BTBD16	Q32M84	506 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	ZNF569	Q5MCW4	686 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	SLC39A5	Q6ZMH5	540 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	COLCA1	Q6ZS62	124 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	NOL8	Q76FK4	1167 aa	Known RBP	4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	ZNF347	Q96SE7	839 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	MECR	Q9BV79	373 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	AAMDC	Q9H7C9	122 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	COG5	Q9UP83	839 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	SLC8A2	Q9UPR5	921 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	SQOR	Q9Y6N5	450 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723	TTC3	P53804	2025 aa		4.75	□□□□□ -1.65
PHC3-212	ENST00000490723		A0A087WV62	115 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	TRBV5-3	A0A0A0MS03	114 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723		A0A1W2PPC1	479 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	GOLGA6L3	A6NEY3	463 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	LGALS16	A8MUM7	142 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	GYS1	P13807	737 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	SCP2	P22307	547 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	CIITA	P33076	1130 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	GRK5	P34947	590 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	TAS2R50	P59544	299 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	RPL15	P61313	204 aa	Known RBP	4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	HDAC1	Q13547	482 aa	Predicted RBP	4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	PGM5	Q15124	567 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	MIDN	Q504T8	468 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	PGBD2	Q6P3X8	592 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	PIM3	Q86V86	326 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	FAM47B	Q8NA70	645 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	SLC44A5	Q8NCS7	719 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	FAM71B	Q8TC56	605 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	ZFPM2	Q8WW38	1151 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	NAF1	Q96HR8	494 aa	Known RBP	4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	PIMREG	Q9BSJ6	248 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	OSBPL5	Q9H0X9	879 aa	Predicted RBP	4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	TP63	Q9H3D4	680 aa	Predicted RBP	4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	SFXN1	Q9H9B4	322 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	ERVK-5	Q9HDB9	667 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	MSRB1	Q9NZV6	116 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	UTS2R	Q9UKP6	389 aa		4.74	□□□□□ -1.65
PHC3-212	ENST00000490723	TBC1D3D	A0A087WVF3	549 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	TBC1D3I	A0A087WXS9	549 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	TBC1D3E	A0A087X179	549 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	TBC1D3K	A0A087X1G2	549 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	DPPA5	A6NC42	116 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	TBC1D3B	A6NDS4	549 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	TBC1D3L	B9A6J9	549 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	PRPF4	O43172	522 aa	Known RBP eCLIP	4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	TULP3	O75386	442 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	SGPL1	O95470	568 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	NTN1	O95631	604 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	NFATC1	O95644	943 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	ALDOA	P04075	364 aa	Known RBP	4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	ALDOC	P09972	364 aa	Known RBP	4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	TBC1D3H	P0C7X1	549 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	TGM2	P21980	687 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	FAM3B	P58499	235 aa	Predicted RBP	4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	TNFAIP2	Q03169	654 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	TLE3	Q04726	772 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	SF3A3	Q12874	501 aa	Known RBP eCLIP	4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	BRD3	Q15059	726 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	PFKFB4	Q16877	469 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	MANEA	Q5SRI9	462 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	TBC1D3G	Q6DHY5	549 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	TBC1D3C	Q6IPX1	549 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	TOGARAM2	Q6ZUX3	1019 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	B4GALNT4	Q76KP1	1039 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	ADGRF3	Q8IZF5	1079 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	MMP21	Q8N119	569 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	ATG16L2	Q8NAA4	619 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	ADPRHL1	Q8NDY3	354 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	MPLKIP	Q8TAP9	179 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	HMGB4	Q8WW32	186 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	VCPIP1	Q96JH7	1222 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	HTATIP2	Q9BUP3	242 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	WDR12	Q9GZL7	423 aa	Known RBP	4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	ZNF700	Q9H0M5	742 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	SEMA4B	Q9NPR2	832 aa	Predicted RBP	4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	THSD1	Q9NS62	852 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	NFU1	Q9UMS0	254 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	ZBTB1	Q9Y2K1	713 aa		4.73	□□□□□ -1.65
PHC3-212	ENST00000490723	C3orf70	A6NLC5	250 aa	Predicted RBP	4.72	□□□□□ -1.65
PHC3-212	ENST00000490723	ZNF814	B7Z6K7	855 aa		4.72	□□□□□ -1.65
PHC3-212	ENST00000490723	NDUFB8	O95169	186 aa		4.72	□□□□□ -1.65
PHC3-212	ENST00000490723	FOXL2	P58012	376 aa		4.72	□□□□□ -1.65
PHC3-212	ENST00000490723	FHL1	Q13642	323 aa		4.72	□□□□□ -1.65
PHC3-212	ENST00000490723	PTK2B	Q14289	1009 aa		4.72	□□□□□ -1.65
PHC3-212	ENST00000490723	PUM3	Q15397	648 aa	Known RBP	4.72	□□□□□ -1.65
PHC3-212	ENST00000490723	DLGAP5	Q15398	846 aa		4.72	□□□□□ -1.65
PHC3-212	ENST00000490723	TWIST1	Q15672	202 aa		4.72	□□□□□ -1.65
PHC3-212	ENST00000490723	SMTNL2	Q2TAL5	461 aa		4.72	□□□□□ -1.65
PHC3-212	ENST00000490723	LEXM	Q3ZCV2	418 aa		4.72	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms