RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 ZNF213O14771 459 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 TAF5LO75529 589 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 RPP40O75818 363 aaKnown RBP4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 CER1O95813 267 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 MT-CO3P00414 261 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 CHRM5P08912 532 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 TBC1D3HP0C7X1 549 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 PRR23D2P0DMB1 279 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 KLRK1P26718 216 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 DUSP1P28562 367 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 MCM5P33992 734 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 GRK5P34947 590 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 CFHR3Q02985 330 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 DNASE1L3Q13609 305 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 POSTNQ15063 836 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 BTBD16Q32M84 506 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 TRIM60Q495X7 471 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 MIDNQ504T8 468 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 FAM90A2PQ658T7 463 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 TBC1D3GQ6DHY5 549 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 TBC1D3CQ6IPX1 549 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 KIAA1161Q6NSJ0 714 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 TMEM88Q6PEY1 159 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 DCDC5Q6ZRR9 648 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 C2CD5Q86YS7 1000 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 TBC1D3Q8IZP1 549 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 MAFAQ8NHW3 353 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 STT3BQ8TCJ2 826 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 GLMPQ8WWB7 406 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 SDCCAG3Q96C92 435 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 LENG8Q96PV6 779 aaPredicted RBP4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 NAP1L4Q99733 375 aaKnown RBP4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 TRNAU1APQ9NX07 287 aaKnown RBP4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 CNTN6Q9UQ52 1028 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 AFG3L2Q9Y4W6 797 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 FER1L4A9Z1Z3 1794 aa4.24□□□□□ -1.73
HMGB1P36-201ENST00000487709 GXYLT2A0PJZ3 443 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 CYSRT1A8MQ03 144 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 KIF28PB7ZC32 967 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 TMEM232C9JQI7 657 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 POC1B-GALNT4F8VUJ3 575 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 IPO5O00410 1097 aaKnown RBP4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 HNRNPRO43390 633 aaKnown RBP4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 CA12O43570 354 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 CBFA2T3O75081 653 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 PDE8BO95263 885 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 FPR3P25089 353 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 MAPK9P45984 424 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 LINC00205P59089 165 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 ACTR2P61160 394 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 WDR5P61964 334 aaKnown RBP4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 CYP4F2P78329 520 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 TLE3Q04726 772 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 GOLGA8FQ08AF8 430 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 MFSD13AQ14CX5 517 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 PFKFB3Q16875 520 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 Q4G0T1 1027 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 DGAT2L7PQ6IED9 249 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 GRHL2Q6ISB3 625 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 LIN54Q6MZP7 749 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 JMJD6Q6NYC1 403 aaPredicted RBP4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 MSANTD2Q6P1R3 559 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 PIK3AP1Q6ZUJ8 805 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 GALNT4Q8N4A0 578 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 TMEM57Q8N5G2 664 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 NANOGP1Q8N7R0 232 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 FSIP1Q8NA03 581 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 PNLDC1Q8NA58 520 aaKnown RBP4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 SMRP1Q8NCR6 262 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 SPPL3Q8TCT6 385 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 ADAMTS18Q8TE60 1221 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 SLC22A17Q8WUG5 538 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 AFG1LQ8WV93 481 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 TBC1D20Q96BZ9 403 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 CTHRC1Q96CG8 243 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 C5orf34Q96MH7 638 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 PIGSQ96S52 555 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 NOD2Q9HC29 1040 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 KCNK9Q9NPC2 374 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 FSCN3Q9NQT6 498 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 ARL8BQ9NVJ2 186 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 LPAR3Q9UBY5 353 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 PCDHB2Q9Y5E7 798 aa4.23□□□□□ -1.73
HMGB1P36-201ENST00000487709 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 H0Y3Z8 333 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 NKX2-8O15522 239 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 TFRCP02786 760 aaKnown RBP4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 TNNT1P13805 278 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 GYS1P13807 737 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 VEGFAP15692 232 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 GALNSP34059 522 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 ADD2P35612 726 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 RBM6P78332 1123 aaKnown RBP4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 GPC5P78333 572 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 RAE1P78406 368 aaKnown RBP4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 EFR3AQ14156 821 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 LARS2Q15031 903 aaKnown RBP4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 FAM187BQ17R55 369 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 FBXO47Q5MNV8 452 aa4.22□□□□□ -1.73
HMGB1P36-201ENST00000487709 TTC22Q5TAA0 569 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms