RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 CLEC4CQ8WTT0 213 aa5.74□□□□□ -1.49
COPA-203ENST00000481040 SNX19Q92543 992 aa5.74□□□□□ -1.49
COPA-203ENST00000481040 FAM136AQ96C01 138 aa5.74□□□□□ -1.49
COPA-203ENST00000481040 C5orf34Q96MH7 638 aa5.74□□□□□ -1.49
COPA-203ENST00000481040 KRTAP4-11Q9BYQ6 195 aa5.74□□□□□ -1.49
COPA-203ENST00000481040 CTDSP1Q9GZU7 261 aa5.74□□□□□ -1.49
COPA-203ENST00000481040 SMARCAD1Q9H4L7 1026 aa5.74□□□□□ -1.49
COPA-203ENST00000481040 RETREG1Q9H6L5 497 aa5.74□□□□□ -1.49
COPA-203ENST00000481040 ZWILCHQ9H900 591 aa5.74□□□□□ -1.49
COPA-203ENST00000481040 THAP1Q9NVV9 213 aa5.74□□□□□ -1.49
COPA-203ENST00000481040 MORF4L1Q9UBU8 362 aa5.74□□□□□ -1.49
COPA-203ENST00000481040 A0A1W2PQ09 198 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 SEC14L2O76054 403 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 RECQL4O94761 1208 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 TGFB3P10600 412 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 RARGP13631 454 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 COX7A2P14406 83 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 MUTP22033 750 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 RPS19P39019 145 aaKnown RBP5.73□□□□□ -1.49
COPA-203ENST00000481040 EIF3BP55884 814 aaKnown RBP5.73□□□□□ -1.49
COPA-203ENST00000481040 LINC00310P59036 64 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 RPS7P62081 194 aaKnown RBP5.73□□□□□ -1.49
COPA-203ENST00000481040 PLIN5Q00G26 463 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 TLE3Q04726 772 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 NEXNQ0ZGT2 675 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 PRPF4BQ13523 1007 aaKnown RBP5.73□□□□□ -1.49
COPA-203ENST00000481040 CBFBQ13951 182 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 SCARB2Q14108 478 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 SLC9B1Q4ZJI4 515 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 BMP2KLQ5H9B9 411 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 DCAF17Q5H9S7 520 aaPredicted RBP5.73□□□□□ -1.49
COPA-203ENST00000481040 PLEKHS1Q5SXH7 462 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 KIAA1614Q5VZ46 1190 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 FAM47EQ6ZV65 393 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 P3H2Q8IVL5 708 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 ZNF713Q8N859 430 aaPredicted RBP5.73□□□□□ -1.49
COPA-203ENST00000481040 NOC3LQ8WTT2 800 aaKnown RBP5.73□□□□□ -1.49
COPA-203ENST00000481040 NCSTNQ92542 709 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 NPAS1Q99742 590 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.73□□□□□ -1.49
COPA-203ENST00000481040 DPCDQ9BVM2 203 aaPredicted RBP5.73□□□□□ -1.49
COPA-203ENST00000481040 PLA2G12BQ9BX93 195 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 MAK16Q9BXY0 300 aaKnown RBP5.73□□□□□ -1.49
COPA-203ENST00000481040 AMBRA1Q9C0C7 1298 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 PDE7BQ9NP56 450 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 ARGLU1Q9NWB6 273 aaPredicted RBP5.73□□□□□ -1.49
COPA-203ENST00000481040 RNF181Q9P0P0 153 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 SLCO3A1Q9UIG8 710 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 OSGIN2Q9Y236 505 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 SH3BP1Q9Y3L3 701 aa5.73□□□□□ -1.49
COPA-203ENST00000481040 CCDC187A0A096LP49 1063 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 A0A1W2PQM1 296 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 MYADML2A6NDP7 307 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 TCAF2A6NFQ2 919 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 A8MVJ9 347 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 MYO1GB0I1T2 1018 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 FFAR3O14843 346 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 PPM1DO15297 605 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 ZFPL1O95159 310 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 METTL18O95568 372 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 ERBB2P04626 1255 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 EIF2S1P05198 315 aaKnown RBP5.72□□□□□ -1.49
COPA-203ENST00000481040 LYL1P12980 280 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 PI3P19957 117 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 CPA2P48052 419 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 CTCFP49711 727 aaPredicted RBP5.72□□□□□ -1.49
COPA-203ENST00000481040 TAS2R50P59544 299 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 CDK18Q07002 472 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 TMEM115Q12893 351 aaPredicted RBP5.72□□□□□ -1.49
COPA-203ENST00000481040 SSPNQ14714 243 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 FAM187BQ17R55 369 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 C1orf141Q5JVX7 400 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 NUGGCQ68CJ6 796 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 NCEH1Q6PIU2 408 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 MTHFD1LQ6UB35 978 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 ZSCAN30Q86W11 494 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 SCML4Q8N228 414 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 CHCHD4Q8N4Q1 142 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.72□□□□□ -1.49
COPA-203ENST00000481040 TOR1AIP2Q8NFQ8 470 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 TMEM125Q96AQ2 219 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 TRMT61AQ96FX7 289 aaKnown RBP5.72□□□□□ -1.49
COPA-203ENST00000481040 LRRC37BQ96QE4 947 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 MPHOSPH9Q99550 1183 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 CLSTN3Q9BQT9 956 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 HTATIP2Q9BUP3 242 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 EHD2Q9NZN4 543 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 MPP6Q9NZW5 540 aa5.72□□□□□ -1.49
COPA-203ENST00000481040 ZNF70Q9UC06 446 aaPredicted RBP5.72□□□□□ -1.49
COPA-203ENST00000481040 SOS1Q07889 1333 aaPredicted RBP5.72□□□□□ -1.49
COPA-203ENST00000481040 FYB1O15117 783 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 GPR42O15529 346 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 B4GALT3O60512 393 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 TBCAO75347 108 aaKnown RBP5.71□□□□□ -1.5
COPA-203ENST00000481040 CFIP05156 583 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 MSX2P35548 267 aaPredicted RBP5.71□□□□□ -1.5
COPA-203ENST00000481040 HNF1BP35680 557 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 MVDP53602 400 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 PSMC6P62333 389 aa5.71□□□□□ -1.5
COPA-203ENST00000481040 CRYMQ14894 314 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms