RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 WDR75Q8IWA0 830 aaKnown RBP13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 PLD5Q8N7P1 536 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 NETO2Q8NC67 525 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 DTNBP1Q96EV8 351 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 OXCT2Q9BYC2 517 aaPredicted RBP13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 MAN1C1Q9NR34 630 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 MKS1Q9NXB0 559 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 GALNT8Q9NY28 637 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 APOBEC2Q9Y235 224 aaKnown RBP13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 MCM3APO60318 1980 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 DNAJC25-GNG10A0A024R161 153 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 TFAP2AP05549 437 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 CYP2C8P10632 490 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 NCF2P19878 526 aaPredicted RBP13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 CRADDP78560 199 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 RBM44Q6ZP01 1051 aaKnown RBP13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 ACTRT2Q8TDY3 377 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 SIGLEC10Q96LC7 697 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 SORT1Q99523 831 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 PAK5Q9P286 719 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 AKT3Q9Y243 479 aa13.7□□□□□ -0.22
PDZRN3-208ENST00000479530 FAM159BA6NKW6 160 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 TRDMT1O14717 391 aaKnown RBP13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 BIRC5O15392 142 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 MED7O43513 233 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 ALDOAP04075 364 aaKnown RBP13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 CDK18Q07002 472 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 PMF1Q6P1K2 205 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 ARCQ7LC44 396 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 SCUBE3Q8IX30 993 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 GPC2Q8N158 579 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 PRICKLE1Q96MT3 831 aaPredicted RBP13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 SMARCAD1Q9H4L7 1026 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 FAM49BQ9NUQ9 324 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 DDX18Q9NVP1 670 aaKnown RBP13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 TSPAN16Q9UKR8 245 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 GINS2Q9Y248 185 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 C2CD4BA6NLJ0 364 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 ZNF195O14628 629 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 DCXO43602 365 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 ENDOD1O94919 500 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 PRKCGP05129 697 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 MSX2P35548 267 aaPredicted RBP13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 DEUP1Q05D60 604 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 TMEM62Q0P6H9 643 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 TBL3Q12788 808 aaKnown RBP13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 MYBPC3Q14896 1274 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 PCLAFQ15004 111 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 KBTBD6Q86V97 674 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 C10orf107Q8IVU9 208 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 PQLC3Q8N755 202 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 DEPDC1BQ8WUY9 529 aa13.69□□□□□ -0.22
PDZRN3-208ENST00000479530 MYO18AQ92614 2054 aaKnown RBP13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 ZBTB14O43829 449 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 HBP1O60381 514 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 ITGA2BP08514 1039 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 F7P08709 466 aaPredicted RBP13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 SNAPC2Q13487 334 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 PDE1CQ14123 709 aaPredicted RBP13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 KCTD2Q14681 263 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 CCDC14Q49A88 953 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 PPM1JQ5JR12 505 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 PDPK2PQ6A1A2 396 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 GSDMBQ8TAX9 411 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 RAB3IL1Q8TBN0 382 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 KHSRPQ92945 711 aaKnown RBP eCLIP13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 RNF157Q96PX1 679 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 MRPL45Q9BRJ2 306 aaKnown RBP13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 ZNF358Q9NW07 568 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 HES2Q9Y543 173 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 TPP1O14773 563 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 ZBED1O96006 694 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 ATP6V1B1P15313 513 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 PMLP29590 882 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 FDFT1P37268 417 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 GABRB2P47870 512 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 ZNF143P52747 638 aaPredicted RBP13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 ARHGAP1Q07960 439 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 PPP1R26Q5T8A7 1209 aaPredicted RBP13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 ACOT1Q86TX2 421 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 ICA1LQ8NDH6 482 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 CLEC4CQ8WTT0 213 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 AFG1LQ8WV93 481 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 PGLYRP2Q96PD5 576 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 EBNA1BP2Q99848 306 aaKnown RBP13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 SGIP1Q9BQI5 828 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 NGRNQ9NPE2 291 aaKnown RBP13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 ITGA11Q9UKX5 1188 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 SORCS3Q9UPU3 1222 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 PPP2R3BQ9Y5P8 575 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 PSAT1Q9Y617 370 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 BPTFQ12830 3046 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 WDR90Q96KV7 1748 aa13.68□□□□□ -0.22
PDZRN3-208ENST00000479530 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.67□□□□□ -0.22
PDZRN3-208ENST00000479530 SMIM31A0A1B0GVY4 71 aa13.67□□□□□ -0.22
PDZRN3-208ENST00000479530 PDLIM1O00151 329 aa13.67□□□□□ -0.22
PDZRN3-208ENST00000479530 KLHL2O95198 593 aa13.67□□□□□ -0.22
PDZRN3-208ENST00000479530 IL18RAPO95256 599 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms