RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 POLR2DO15514 142 aaKnown RBP17.9■□□□□ 0.46
VIM-204ENST00000478746 BRINP1O60477 761 aa17.9■□□□□ 0.46
VIM-204ENST00000478746 RNASEH1O60930 286 aaKnown RBP17.9■□□□□ 0.46
VIM-204ENST00000478746 PPP6R2O75170 966 aa17.9■□□□□ 0.46
VIM-204ENST00000478746 AFMP43652 599 aa17.9■□□□□ 0.46
VIM-204ENST00000478746 ARRB1P49407 418 aaPredicted RBP17.9■□□□□ 0.46
VIM-204ENST00000478746 CXADRP78310 365 aa17.9■□□□□ 0.46
VIM-204ENST00000478746 CCDC173Q0VFZ6 552 aa17.9■□□□□ 0.46
VIM-204ENST00000478746 CUL4BQ13620 913 aa17.9■□□□□ 0.46
VIM-204ENST00000478746 ADGRF1Q5T601 910 aa17.9■□□□□ 0.46
VIM-204ENST00000478746 CEP135Q66GS9 1140 aa17.9■□□□□ 0.46
VIM-204ENST00000478746 ZC3H3Q8IXZ2 948 aaKnown RBP17.9■□□□□ 0.46
VIM-204ENST00000478746 TMEM174Q8WUU8 243 aa17.9■□□□□ 0.46
VIM-204ENST00000478746 MTG2Q9H4K7 406 aa17.9■□□□□ 0.46
VIM-204ENST00000478746 OLA1Q9NTK5 396 aaKnown RBP17.9■□□□□ 0.46
VIM-204ENST00000478746 FRMD4BQ9Y2L6 1034 aa17.9■□□□□ 0.46
VIM-204ENST00000478746 CUTAO60888 179 aa17.89■□□□□ 0.45
VIM-204ENST00000478746 ZBED1O96006 694 aa17.89■□□□□ 0.45
VIM-204ENST00000478746 NR3C1P04150 777 aa17.89■□□□□ 0.45
VIM-204ENST00000478746 SLFN14P0C7P3 912 aa17.89■□□□□ 0.45
VIM-204ENST00000478746 GLDCP23378 1020 aa17.89■□□□□ 0.45
VIM-204ENST00000478746 TLE3Q04726 772 aa17.89■□□□□ 0.45
VIM-204ENST00000478746 BNIP3Q12983 259 aa17.89■□□□□ 0.45
VIM-204ENST00000478746 ILKQ13418 452 aa17.89■□□□□ 0.45
VIM-204ENST00000478746 RAB41Q5JT25 222 aa17.89■□□□□ 0.45
VIM-204ENST00000478746 C1orf220Q5T0J3 134 aa17.89■□□□□ 0.45
VIM-204ENST00000478746 SHC4Q6S5L8 630 aa17.89■□□□□ 0.45
VIM-204ENST00000478746 PCSK4Q6UW60 755 aa17.89■□□□□ 0.45
VIM-204ENST00000478746 PIGZQ86VD9 579 aa17.89■□□□□ 0.45
VIM-204ENST00000478746 NIF3L1Q9GZT8 377 aa17.89■□□□□ 0.45
VIM-204ENST00000478746 NEUROG2Q9H2A3 272 aa17.89■□□□□ 0.45
VIM-204ENST00000478746 SFMBT1Q9UHJ3 866 aa17.89■□□□□ 0.45
VIM-204ENST00000478746 STOML2Q9UJZ1 356 aa17.89■□□□□ 0.45
VIM-204ENST00000478746 MTMR6Q9Y217 621 aa17.89■□□□□ 0.45
VIM-204ENST00000478746 HBS1LQ9Y450 684 aaKnown RBP17.89■□□□□ 0.45
VIM-204ENST00000478746 A0A1W2PR77 199 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 CKMT2P17540 419 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 EPHA8P29322 1005 aaPredicted RBP17.88■□□□□ 0.45
VIM-204ENST00000478746 VAMP7P51809 220 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 TKTL1P51854 596 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 SLC8A3P57103 927 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 ST8SIA6P61647 398 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 STK4Q13043 487 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 KCNJ12Q14500 433 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 TAF1BQ53T94 588 aaPredicted RBP17.88■□□□□ 0.45
VIM-204ENST00000478746 PM20D1Q6GTS8 502 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 SPACA3Q8IXA5 215 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 CACTIN-AS1Q8N1I8 211 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 CCDC150Q8NCX0 1101 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 OR2T34Q8NGX1 318 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 RNF139Q8WU17 664 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 NDRG1Q92597 394 aaKnown RBP17.88■□□□□ 0.45
VIM-204ENST00000478746 OMDQ99983 421 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 KCTD10Q9H3F6 313 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 SERGEFQ9UGK8 458 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 CLCA2Q9UQC9 943 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 ATMQ13315 3056 aa17.88■□□□□ 0.45
VIM-204ENST00000478746 A0A1W2PP55 124 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 ERVH48-1M5A8F1 160 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 TLR4O00206 839 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 PDXKO00764 312 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 WNT9AO14904 365 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 MID1O15344 667 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 TBL1XO60907 577 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 RNASEH2AO75792 299 aaKnown RBP17.87■□□□□ 0.45
VIM-204ENST00000478746 LATS1O95835 1130 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 CD70P32970 193 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 GCLMP48507 274 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 CCR5P51681 352 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 KCNH2Q12809 1159 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 CST6Q15828 149 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 TBC1D25Q3MII6 688 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 SLC45A4Q5BKX6 768 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 ANKRD52Q8NB46 1076 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 TAS1R2Q8TE23 839 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 SERAC1Q96JX3 654 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 ULBP1Q9BZM6 244 aa17.87■□□□□ 0.45
VIM-204ENST00000478746 ARID1BQ8NFD5 2236 aaPredicted RBP17.86■□□□□ 0.45
VIM-204ENST00000478746 SIN3BO75182 1162 aa17.86■□□□□ 0.45
VIM-204ENST00000478746 PDIA4P13667 645 aaKnown RBP17.86■□□□□ 0.45
VIM-204ENST00000478746 RXRGP48443 463 aa17.86■□□□□ 0.45
VIM-204ENST00000478746 SGSHP51688 502 aa17.86■□□□□ 0.45
VIM-204ENST00000478746 MPP7Q5T2T1 576 aa17.86■□□□□ 0.45
VIM-204ENST00000478746 ERICH1Q86X53 443 aa17.86■□□□□ 0.45
VIM-204ENST00000478746 MMAAQ8IVH4 418 aaKnown RBP17.86■□□□□ 0.45
VIM-204ENST00000478746 DHX40Q8IX18 779 aaKnown RBP17.86■□□□□ 0.45
VIM-204ENST00000478746 OXR1Q8N573 874 aa17.86■□□□□ 0.45
VIM-204ENST00000478746 KIAA0895Q8NCT3 520 aa17.86■□□□□ 0.45
VIM-204ENST00000478746 WFDC5Q8TCV5 224 aa17.86■□□□□ 0.45
VIM-204ENST00000478746 RFFLQ8WZ73 363 aa17.86■□□□□ 0.45
VIM-204ENST00000478746 EDEM1Q92611 657 aa17.86■□□□□ 0.45
VIM-204ENST00000478746 TTC17Q96AE7 1141 aa17.86■□□□□ 0.45
VIM-204ENST00000478746 MYO19Q96H55 970 aa17.86■□□□□ 0.45
VIM-204ENST00000478746 ZNF396Q96N95 335 aaPredicted RBP17.86■□□□□ 0.45
VIM-204ENST00000478746 LGMNQ99538 433 aa17.86■□□□□ 0.45
VIM-204ENST00000478746 ERVMER34-1Q9H9K5 563 aa17.86■□□□□ 0.45
VIM-204ENST00000478746 ADAMTS1Q9UHI8 967 aa17.86■□□□□ 0.45
VIM-204ENST00000478746 SLC8A1P32418 973 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 NXPH1P58417 271 aa17.85■□□□□ 0.45
VIM-204ENST00000478746 INSM1Q01101 510 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms