RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 CBWD3Q5JTY5 395 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 CBWD5Q5RIA9 395 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 ANKRD40Q6AI12 368 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 VSTM1Q6UX27 236 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 DENND5BQ6ZUT9 1274 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 GPRIN1Q7Z2K8 1008 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 CELF5Q8N6W0 485 aaKnown RBP8.37□□□□□ -1.07
CHD6-207ENST00000476641 SPATA20Q8TB22 786 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 SLC2A14Q8TDB8 520 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 CSGALNACT1Q8TDX6 532 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 SH3RF2Q8TEC5 729 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 WBP2Q969T9 261 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 CCDC47Q96A33 483 aaKnown RBP8.37□□□□□ -1.07
CHD6-207ENST00000476641 SPATA17Q96L03 361 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 C8orf48Q96LL4 319 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 SMOQ99835 787 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 TTLL2Q9BWV7 592 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 ELOVL4Q9GZR5 314 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 RNF38Q9H0F5 515 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 LINC00597Q9H2U6 94 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 TRPV5Q9NQA5 729 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 TDP1Q9NUW8 608 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 OBP2AQ9NY56 170 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 GMIPQ9P107 970 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 NCOR2Q9Y618 2525 aa8.37□□□□□ -1.07
CHD6-207ENST00000476641 H3BS24 57 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 MAN2B1O00754 1011 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 TDGF1P13385 188 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 KRT13P13646 458 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 HDCP19113 662 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 DDX6P26196 483 aaKnown RBP eCLIP8.36□□□□□ -1.07
CHD6-207ENST00000476641 ANXA13P27216 316 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 PSMC2P35998 433 aaKnown RBP8.36□□□□□ -1.07
CHD6-207ENST00000476641 AP3M2P53677 418 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 SLC5A3P53794 718 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 MAP3K7CLP57077 242 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 SRSF5Q13243 272 aaKnown RBP8.36□□□□□ -1.07
CHD6-207ENST00000476641 MAPRE1Q15691 268 aaKnown RBP8.36□□□□□ -1.07
CHD6-207ENST00000476641 SGSM1Q2NKQ1 1148 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 ITPRIPL2Q3MIP1 535 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 ZNF394Q53GI3 561 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 DCAF17Q5H9S7 520 aaPredicted RBP8.36□□□□□ -1.07
CHD6-207ENST00000476641 ZNF658Q5TYW1 1059 aaPredicted RBP8.36□□□□□ -1.07
CHD6-207ENST00000476641 KLHL10Q6JEL2 608 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 FSTL4Q6MZW2 842 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 ATG14Q6ZNE5 492 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 INTS8Q75QN2 995 aaKnown RBP8.36□□□□□ -1.07
CHD6-207ENST00000476641 SFTPA1Q8IWL2 248 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 ADSSL1Q8N142 457 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 MFSD4AQ8N468 514 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 DCLK2Q8N568 766 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 KCT2Q8NC54 265 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 NKD2Q969F2 451 aaPredicted RBP8.36□□□□□ -1.07
CHD6-207ENST00000476641 SMARCE1Q969G3 411 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 E2F7Q96AV8 911 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 ALKBH8Q96BT7 664 aaKnown RBP8.36□□□□□ -1.07
CHD6-207ENST00000476641 DMRTB1Q96MA1 342 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 KRTAP9-3Q9BYQ3 159 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 OSBPL6Q9BZF3 934 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 EPB41L4BQ9H329 900 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 PRMT8Q9NR22 394 aaPredicted RBP8.36□□□□□ -1.07
CHD6-207ENST00000476641 UXTQ9UBK9 157 aaPredicted RBP8.36□□□□□ -1.07
CHD6-207ENST00000476641 CHORDC1Q9UHD1 332 aaPredicted RBP8.36□□□□□ -1.07
CHD6-207ENST00000476641 TPX2Q9ULW0 747 aaKnown RBP8.36□□□□□ -1.07
CHD6-207ENST00000476641 CPQQ9Y646 472 aa8.36□□□□□ -1.07
CHD6-207ENST00000476641 DCHS1Q96JQ0 3298 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 LEFTY2O00292 366 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 IKBKBO14920 756 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 MAPK13O15264 365 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 LRIG2O94898 1065 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 SLITRK5O94991 958 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 OAS1P00973 400 aaKnown RBP8.35□□□□□ -1.07
CHD6-207ENST00000476641 EGFP01133 1207 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 CALCAP01258 141 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 RPL13P26373 211 aaKnown RBP8.35□□□□□ -1.07
CHD6-207ENST00000476641 RPS9P46781 194 aaKnown RBP8.35□□□□□ -1.07
CHD6-207ENST00000476641 MXI1P50539 228 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 STX17P56962 302 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 LRMPQ12912 555 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 RUNX3Q13761 415 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 ZNF268Q14587 947 aaPredicted RBP8.35□□□□□ -1.07
CHD6-207ENST00000476641 LPAL2Q16609 132 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 GAB4Q2WGN9 574 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 EDRF1Q3B7T1 1238 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 HEATR6Q6AI08 1181 aaKnown RBP8.35□□□□□ -1.07
CHD6-207ENST00000476641 ZC3H3Q8IXZ2 948 aaKnown RBP8.35□□□□□ -1.07
CHD6-207ENST00000476641 FBXO32Q969P5 355 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 CCDC120Q96HB5 630 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 NELL2Q99435 816 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 DUSP9Q99956 384 aaKnown RBP8.35□□□□□ -1.07
CHD6-207ENST00000476641 IRF2BPLQ9H1B7 796 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 C8orf33Q9H7E9 229 aaPredicted RBP8.35□□□□□ -1.07
CHD6-207ENST00000476641 CCSER2Q9H7U1 834 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 TMEM8AQ9HCN3 771 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 DUS2Q9NX74 493 aaKnown RBP8.35□□□□□ -1.07
CHD6-207ENST00000476641 TRPM5Q9NZQ8 1165 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 NUDT5Q9UKK9 219 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 ARHGAP26Q9UNA1 814 aa8.35□□□□□ -1.07
CHD6-207ENST00000476641 MRPS17Q9Y2R5 130 aaKnown RBP8.35□□□□□ -1.07
CHD6-207ENST00000476641 TCAF2A6NFQ2 919 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms