RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 KRT5P13647 590 aa19.9■□□□□ 0.78
COL9A3-206ENST00000466532 POLR2EP19388 210 aaKnown RBP19.9■□□□□ 0.78
COL9A3-206ENST00000466532 MARSP56192 900 aaKnown RBP19.9■□□□□ 0.78
COL9A3-206ENST00000466532 PAK1Q13153 545 aa19.9■□□□□ 0.78
COL9A3-206ENST00000466532 NADSYN1Q6IA69 706 aa19.9■□□□□ 0.78
COL9A3-206ENST00000466532 MFN1Q8IWA4 741 aa19.9■□□□□ 0.78
COL9A3-206ENST00000466532 SCUBE3Q8IX30 993 aa19.9■□□□□ 0.78
COL9A3-206ENST00000466532 ZNF557Q8N988 423 aaPredicted RBP19.9■□□□□ 0.78
COL9A3-206ENST00000466532 HJURPQ8NCD3 748 aaPredicted RBP19.9■□□□□ 0.78
COL9A3-206ENST00000466532 DQX1Q8TE96 717 aaKnown RBP19.9■□□□□ 0.78
COL9A3-206ENST00000466532 FAM149B1Q96BN6 582 aa19.9■□□□□ 0.78
COL9A3-206ENST00000466532 FCRL2Q96LA5 508 aaPredicted RBP19.9■□□□□ 0.78
COL9A3-206ENST00000466532 CAMK1GQ96NX5 476 aa19.9■□□□□ 0.78
COL9A3-206ENST00000466532 SERPINB11Q96P15 392 aa19.9■□□□□ 0.78
COL9A3-206ENST00000466532 DDX50Q9BQ39 737 aaKnown RBP19.9■□□□□ 0.78
COL9A3-206ENST00000466532 SRRTQ9BXP5 876 aaKnown RBP19.9■□□□□ 0.78
COL9A3-206ENST00000466532 INTS2Q9H0H0 1204 aaKnown RBP19.9■□□□□ 0.78
COL9A3-206ENST00000466532 NEUROG3Q9Y4Z2 214 aa19.9■□□□□ 0.78
COL9A3-206ENST00000466532 TYW5A2RUC4 315 aaKnown RBP19.89■□□□□ 0.77
COL9A3-206ENST00000466532 GADD45BO75293 160 aaPredicted RBP19.89■□□□□ 0.77
COL9A3-206ENST00000466532 RDXP35241 583 aaKnown RBP19.89■□□□□ 0.77
COL9A3-206ENST00000466532 GPD2P43304 727 aa19.89■□□□□ 0.77
COL9A3-206ENST00000466532 NAXDQ8IW45 347 aa19.89■□□□□ 0.77
COL9A3-206ENST00000466532 SNX19Q92543 992 aa19.89■□□□□ 0.77
COL9A3-206ENST00000466532 GATA6Q92908 595 aa19.89■□□□□ 0.77
COL9A3-206ENST00000466532 PRICKLE1Q96MT3 831 aaPredicted RBP19.89■□□□□ 0.77
COL9A3-206ENST00000466532 PCED1AQ9H1Q7 454 aa19.89■□□□□ 0.77
COL9A3-206ENST00000466532 FBRSQ9HAH7 460 aa19.89■□□□□ 0.77
COL9A3-206ENST00000466532 PRSS16Q9NQE7 514 aa19.89■□□□□ 0.77
COL9A3-206ENST00000466532 KLK13Q9UKR3 277 aa19.89■□□□□ 0.77
COL9A3-206ENST00000466532 ZMIZ1Q9ULJ6 1067 aa19.89■□□□□ 0.77
COL9A3-206ENST00000466532 CNTN6Q9UQ52 1028 aa19.89■□□□□ 0.77
COL9A3-206ENST00000466532 NAALADL1Q9UQQ1 740 aa19.89■□□□□ 0.77
COL9A3-206ENST00000466532 TLR6Q9Y2C9 796 aa19.89■□□□□ 0.77
COL9A3-206ENST00000466532 PCDHB9Q9Y5E1 797 aa19.89■□□□□ 0.77
COL9A3-206ENST00000466532 H0Y626 953 aa19.88■□□□□ 0.77
COL9A3-206ENST00000466532 SART1O43290 800 aaKnown RBP19.88■□□□□ 0.77
COL9A3-206ENST00000466532 TRIM16O95361 564 aa19.88■□□□□ 0.77
COL9A3-206ENST00000466532 DNTTP04053 509 aa19.88■□□□□ 0.77
COL9A3-206ENST00000466532 ACSL1P33121 698 aa19.88■□□□□ 0.77
COL9A3-206ENST00000466532 ACADSBP45954 432 aa19.88■□□□□ 0.77
COL9A3-206ENST00000466532 RPL34P49207 117 aaKnown RBP19.88■□□□□ 0.77
COL9A3-206ENST00000466532 RPS14P62263 151 aaKnown RBP19.88■□□□□ 0.77
COL9A3-206ENST00000466532 NNTQ13423 1086 aa19.88■□□□□ 0.77
COL9A3-206ENST00000466532 TRIP6Q15654 476 aaKnown RBP19.88■□□□□ 0.77
COL9A3-206ENST00000466532 DENND1BQ6P3S1 775 aa19.88■□□□□ 0.77
COL9A3-206ENST00000466532 KDF1Q8NAX2 398 aaPredicted RBP19.88■□□□□ 0.77
COL9A3-206ENST00000466532 ADAM32Q8TC27 787 aa19.88■□□□□ 0.77
COL9A3-206ENST00000466532 C6orf106Q9H6K1 298 aaPredicted RBP19.88■□□□□ 0.77
COL9A3-206ENST00000466532 UBE2TQ9NPD8 197 aaPredicted RBP19.88■□□□□ 0.77
COL9A3-206ENST00000466532 SUN2Q9UH99 717 aa19.88■□□□□ 0.77
COL9A3-206ENST00000466532 ASPMQ8IZT6 3477 aa19.88■□□□□ 0.77
COL9A3-206ENST00000466532 PLXNB3Q9ULL4 1909 aa19.88■□□□□ 0.77
COL9A3-206ENST00000466532 IGF2RP11717 2491 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 CFAP47Q6ZTR5 3102 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 TMEM8BA6NDV4 472 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 CAPN9O14815 690 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 MED7O43513 233 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 CER1O95813 267 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 MOCS2O96007 188 aaPredicted RBP19.87■□□□□ 0.77
COL9A3-206ENST00000466532 C7P10643 843 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 RPS24P62847 133 aaKnown RBP19.87■□□□□ 0.77
COL9A3-206ENST00000466532 ZBTB16Q05516 673 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 ZNF423Q2M1K9 1284 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 TAC4Q86UU9 113 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 CARNMT1Q8N4J0 409 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 CHCHD4Q8N4Q1 142 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 FIBINQ8TAL6 211 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 MYEOVQ96EZ4 313 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 SLC39A13Q96H72 371 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 LMLNQ96KR4 655 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 BTBD1Q9H0C5 482 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 NUCKS1Q9H1E3 243 aaKnown RBP19.87■□□□□ 0.77
COL9A3-206ENST00000466532 GAREM1Q9H706 876 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 IL21RQ9HBE5 538 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 MSRB2Q9Y3D2 182 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 ZFHX4Q86UP3 3567 aa19.87■□□□□ 0.77
COL9A3-206ENST00000466532 WDFY3Q8IZQ1 3526 aa19.86■□□□□ 0.77
COL9A3-206ENST00000466532 LETM1O95202 739 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-206ENST00000466532 FGFR1OPO95684 399 aaKnown RBP19.86■□□□□ 0.77
COL9A3-206ENST00000466532 SEMA4FO95754 770 aa19.86■□□□□ 0.77
COL9A3-206ENST00000466532 MATKP42679 507 aa19.86■□□□□ 0.77
COL9A3-206ENST00000466532 ST8SIA6P61647 398 aa19.86■□□□□ 0.77
COL9A3-206ENST00000466532 BNC1Q01954 994 aa19.86■□□□□ 0.77
COL9A3-206ENST00000466532 CDH18Q13634 790 aa19.86■□□□□ 0.77
COL9A3-206ENST00000466532 TTC31Q49AM3 519 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-206ENST00000466532 MS4A13Q5J8X5 152 aa19.86■□□□□ 0.77
COL9A3-206ENST00000466532 SYPL2Q5VXT5 272 aa19.86■□□□□ 0.77
COL9A3-206ENST00000466532 ZNF776Q68DI1 518 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-206ENST00000466532 IL27RAQ6UWB1 636 aa19.86■□□□□ 0.77
COL9A3-206ENST00000466532 CCDC117Q8IWD4 279 aaPredicted RBP19.86■□□□□ 0.77
COL9A3-206ENST00000466532 CFAP52Q8N1V2 620 aa19.86■□□□□ 0.77
COL9A3-206ENST00000466532 C1orf216Q8TAB5 229 aa19.86■□□□□ 0.77
COL9A3-206ENST00000466532 ZNF606Q8WXB4 792 aa19.86■□□□□ 0.77
COL9A3-206ENST00000466532 TTC17Q96AE7 1141 aa19.86■□□□□ 0.77
COL9A3-206ENST00000466532 TRIM62Q9BVG3 475 aa19.86■□□□□ 0.77
COL9A3-206ENST00000466532 SLC4A5Q9BY07 1137 aa19.86■□□□□ 0.77
COL9A3-206ENST00000466532 MTG2Q9H4K7 406 aa19.86■□□□□ 0.77
COL9A3-206ENST00000466532 INTS6Q9UL03 887 aaKnown RBP19.86■□□□□ 0.77
COL9A3-206ENST00000466532 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms