RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 SNX19Q92543 992 aa22.4■■□□□ 1.18
CPNE1-220ENST00000458038 HSFY1Q96LI6 401 aa22.4■■□□□ 1.18
CPNE1-220ENST00000458038 SGK2Q9HBY8 427 aa22.4■■□□□ 1.18
CPNE1-220ENST00000458038 PRSS16Q9NQE7 514 aa22.4■■□□□ 1.18
CPNE1-220ENST00000458038 PTPRBP23467 1997 aa22.39■■□□□ 1.18
CPNE1-220ENST00000458038 PLXNB3Q9ULL4 1909 aa22.39■■□□□ 1.18
CPNE1-220ENST00000458038 GOLGA6L4A6NEF3 574 aa22.39■■□□□ 1.17
CPNE1-220ENST00000458038 SEMA4FO95754 770 aa22.39■■□□□ 1.17
CPNE1-220ENST00000458038 LCP1P13796 627 aa22.39■■□□□ 1.17
CPNE1-220ENST00000458038 ACSL1P33121 698 aa22.39■■□□□ 1.17
CPNE1-220ENST00000458038 CSNK1EP49674 416 aaKnown RBP22.39■■□□□ 1.17
CPNE1-220ENST00000458038 PTPRNQ16849 979 aa22.39■■□□□ 1.17
CPNE1-220ENST00000458038 TMEM270Q6UE05 265 aa22.39■■□□□ 1.17
CPNE1-220ENST00000458038 CACUL1Q86Y37 369 aa22.39■■□□□ 1.17
CPNE1-220ENST00000458038 RHBDD1Q8TEB9 315 aa22.39■■□□□ 1.17
CPNE1-220ENST00000458038 NT5C1BQ96P26 610 aa22.39■■□□□ 1.17
CPNE1-220ENST00000458038 C6orf106Q9H6K1 298 aaPredicted RBP22.39■■□□□ 1.17
CPNE1-220ENST00000458038 IL21RQ9HBE5 538 aa22.39■■□□□ 1.17
CPNE1-220ENST00000458038 FNDC3AQ9Y2H6 1198 aaKnown RBP22.39■■□□□ 1.17
CPNE1-220ENST00000458038 MUC22E2RYF6 1773 aaPredicted RBP22.39■■□□□ 1.17
CPNE1-220ENST00000458038 ITPR1Q14643 2758 aa22.39■■□□□ 1.17
CPNE1-220ENST00000458038 A0A1B0GVT2 93 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 TYW5A2RUC4 315 aaKnown RBP22.38■■□□□ 1.17
CPNE1-220ENST00000458038 PSMA7O14818 248 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 MSI1O43347 362 aaKnown RBP22.38■■□□□ 1.17
CPNE1-220ENST00000458038 DFNA5O60443 496 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 ACSL4O60488 711 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 TBL1XO60907 577 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 LTFP02788 710 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 CD27P26842 260 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 PPP1R2P41236 205 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 FMO5P49326 533 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 RPS14P62263 151 aaKnown RBP22.38■■□□□ 1.17
CPNE1-220ENST00000458038 SCAPQ12770 1279 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 ZNF776Q68DI1 518 aaPredicted RBP22.38■■□□□ 1.17
CPNE1-220ENST00000458038 PMF1Q6P1K2 205 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 USP30Q70CQ3 517 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 SLCO6A1Q86UG4 719 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 PNPLA1Q8N8W4 532 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 KDM1BQ8NB78 822 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 ENGASEQ8NFI3 743 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 FIBINQ8TAL6 211 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 BAHD1Q8TBE0 780 aaPredicted RBP22.38■■□□□ 1.17
CPNE1-220ENST00000458038 SMARCE1Q969G3 411 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 TTC17Q96AE7 1141 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 CEP63Q96MT8 703 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.38■■□□□ 1.172e-6■■■■■ 55.4
CPNE1-220ENST00000458038 LHX6Q9UPM6 363 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 NCKAP1Q9Y2A7 1128 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 ANKRD6Q9Y2G4 727 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 PCDHB4Q9Y5E5 795 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 APC2O95996 2303 aa22.38■■□□□ 1.17
CPNE1-220ENST00000458038 P4HA2O15460 535 aa22.37■■□□□ 1.17
CPNE1-220ENST00000458038 ASLP04424 464 aa22.37■■□□□ 1.17
CPNE1-220ENST00000458038 TBX4P57082 545 aa22.37■■□□□ 1.17
CPNE1-220ENST00000458038 ST8SIA6P61647 398 aa22.37■■□□□ 1.17
CPNE1-220ENST00000458038 LRMPQ12912 555 aa22.37■■□□□ 1.17
CPNE1-220ENST00000458038 NNTQ13423 1086 aa22.37■■□□□ 1.17
CPNE1-220ENST00000458038 CCDC117Q8IWD4 279 aaPredicted RBP22.37■■□□□ 1.17
CPNE1-220ENST00000458038 HJURPQ8NCD3 748 aaPredicted RBP22.37■■□□□ 1.17
CPNE1-220ENST00000458038 TFAP2BQ92481 460 aa22.37■■□□□ 1.17
CPNE1-220ENST00000458038 IGSF8Q969P0 613 aa22.37■■□□□ 1.17
CPNE1-220ENST00000458038 DHTKD1Q96HY7 919 aaPredicted RBP22.37■■□□□ 1.17
CPNE1-220ENST00000458038 CCDC86Q9H6F5 360 aaKnown RBP22.37■■□□□ 1.17
CPNE1-220ENST00000458038 TM9SF3Q9HD45 589 aa22.37■■□□□ 1.17
CPNE1-220ENST00000458038 FASNP49327 2511 aaKnown RBP22.37■■□□□ 1.17
CPNE1-220ENST00000458038 TAF4O00268 1085 aa22.36■■□□□ 1.17
CPNE1-220ENST00000458038 SART1O43290 800 aaKnown RBP22.36■■□□□ 1.17
CPNE1-220ENST00000458038 RNASEH1O60930 286 aaKnown RBP22.36■■□□□ 1.17
CPNE1-220ENST00000458038 DKK1O94907 266 aa22.36■■□□□ 1.17
CPNE1-220ENST00000458038 RGS7P49802 495 aa22.36■■□□□ 1.17
CPNE1-220ENST00000458038 PMS1P54277 932 aaKnown RBP22.36■■□□□ 1.17
CPNE1-220ENST00000458038 ARID5BQ14865 1188 aa22.36■■□□□ 1.17
CPNE1-220ENST00000458038 KIF19Q2TAC6 998 aa22.36■■□□□ 1.17
CPNE1-220ENST00000458038 FAM133BQ5BKY9 247 aaKnown RBP22.36■■□□□ 1.17
CPNE1-220ENST00000458038 RFWD3Q6PCD5 774 aa22.36■■□□□ 1.17
CPNE1-220ENST00000458038 MFN1Q8IWA4 741 aa22.36■■□□□ 1.17
CPNE1-220ENST00000458038 ZNF366Q8N895 744 aa22.36■■□□□ 1.17
CPNE1-220ENST00000458038 BIRC7Q96CA5 298 aa22.36■■□□□ 1.17
CPNE1-220ENST00000458038 TIGD1Q96MW7 591 aa22.36■■□□□ 1.17
CPNE1-220ENST00000458038 TRIM62Q9BVG3 475 aa22.36■■□□□ 1.17
CPNE1-220ENST00000458038 RSPH9Q9H1X1 276 aaPredicted RBP22.36■■□□□ 1.17
CPNE1-220ENST00000458038 GDPD2Q9HCC8 539 aa22.36■■□□□ 1.17
CPNE1-220ENST00000458038 M0QYV0 167 aa22.35■■□□□ 1.17
CPNE1-220ENST00000458038 PCDHGA12O60330 932 aa22.35■■□□□ 1.17
CPNE1-220ENST00000458038 CD70P32970 193 aa22.35■■□□□ 1.17
CPNE1-220ENST00000458038 SGSHP51688 502 aa22.35■■□□□ 1.17
CPNE1-220ENST00000458038 TMPRSS7Q7RTY8 843 aa22.35■■□□□ 1.17
CPNE1-220ENST00000458038 PPM1KQ8N3J5 372 aa22.35■■□□□ 1.17
CPNE1-220ENST00000458038 GALNT15Q8N3T1 639 aa22.35■■□□□ 1.17
CPNE1-220ENST00000458038 SERPINB11Q96P15 392 aa22.35■■□□□ 1.17
CPNE1-220ENST00000458038 TLR6Q9Y2C9 796 aa22.35■■□□□ 1.17
CPNE1-220ENST00000458038 TMEM131Q92545 1883 aa22.34■■□□□ 1.17
CPNE1-220ENST00000458038 URB1O60287 2271 aaKnown RBP22.34■■□□□ 1.17
CPNE1-220ENST00000458038 GABBR2O75899 941 aa22.34■■□□□ 1.17
CPNE1-220ENST00000458038 FSBPO95073 299 aa22.34■■□□□ 1.17
CPNE1-220ENST00000458038 SLC6A4P31645 630 aa22.34■■□□□ 1.17
CPNE1-220ENST00000458038 GRK6P43250 576 aa22.34■■□□□ 1.17
CPNE1-220ENST00000458038 CCT8P50990 548 aa22.34■■□□□ 1.17
CPNE1-220ENST00000458038 GCNT1Q02742 428 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms