RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 TMEM199Q8N511 208 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 ZFP28Q8NHY6 868 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 WNT8BQ93098 351 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 TMEM143Q96AN5 459 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 MCEEQ96PE7 176 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 FAM49AQ9H0Q0 323 aaPredicted RBP8.36□□□□□ -1.07
LINC00954-202ENST00000449086 USP29Q9HBJ7 922 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 PAIP2BQ9ULR5 123 aaKnown RBP8.36□□□□□ -1.07
LINC00954-202ENST00000449086 PLA2G4CQ9UP65 541 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 CDY2AQ9Y6F7 541 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 TCRBV9S1A1TA0A576 114 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 CAPN14A8MX76 684 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 BOLA2-SMG1P6H3BVE0 249 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 VILLO15195 856 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 WEE2P0C1S8 567 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 CDK4P11802 303 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 DARSP14868 501 aaKnown RBP8.36□□□□□ -1.07
LINC00954-202ENST00000449086 AXLP30530 894 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 OTUD4Q01804 1114 aaKnown RBP8.36□□□□□ -1.07
LINC00954-202ENST00000449086 PPIDQ08752 370 aaKnown RBP8.36□□□□□ -1.07
LINC00954-202ENST00000449086 PPIGQ13427 754 aaKnown RBP eCLIP8.36□□□□□ -1.07
LINC00954-202ENST00000449086 DCTN2Q13561 401 aaKnown RBP8.36□□□□□ -1.07
LINC00954-202ENST00000449086 CAPSQ13938 189 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 GK3PQ14409 553 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 TLR1Q15399 786 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 SLC44A4Q53GD3 710 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 ZNF394Q53GI3 561 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 ZNF618Q5T7W0 954 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 TMCO4Q5TGY1 634 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 TSHZ1Q6ZSZ6 1077 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 PPIL6Q8IXY8 311 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 FAM71DQ8N9W8 422 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 GSDMBQ8TAX9 411 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 ACTL9Q8TC94 416 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 CPT1BQ92523 772 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 SLITRK1Q96PX8 696 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 ARHGAP28Q9P2N2 729 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 STRIP2Q9ULQ0 834 aa8.36□□□□□ -1.07
LINC00954-202ENST00000449086 TRIM43BA6NCK2 446 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 LYPLA1O75608 230 aaPredicted RBP8.35□□□□□ -1.07
LINC00954-202ENST00000449086 TMEM63AO94886 807 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 CHRNA1P02708 482 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 TFAP2AP05549 437 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 SRGAP2CP0DJJ0 459 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 SRGAP2BP0DMP2 458 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 NELFEP18615 380 aaKnown RBP8.35□□□□□ -1.07
LINC00954-202ENST00000449086 EIF4BP23588 611 aaKnown RBP8.35□□□□□ -1.07
LINC00954-202ENST00000449086 STIP1P31948 543 aaKnown RBP8.35□□□□□ -1.07
LINC00954-202ENST00000449086 ETV4P43268 484 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 COPAP53621 1224 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 NLRP11P59045 1033 aaKnown RBP8.35□□□□□ -1.07
LINC00954-202ENST00000449086 MPP3Q13368 585 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 FBXO47Q5MNV8 452 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 MROH9Q5TGP6 573 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 SCARA3Q6AZY7 606 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 SPOCD1Q6ZMY3 1216 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 POLNQ7Z5Q5 900 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 IGDCC3Q8IVU1 814 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 C7orf61Q8IZ16 206 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 RCOR2Q8IZ40 523 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 AGR3Q8TD06 166 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 BSNDQ8WZ55 320 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 TRIM43Q96BQ3 446 aaPredicted RBP8.35□□□□□ -1.07
LINC00954-202ENST00000449086 TRIM11Q96F44 468 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 NDUFA13Q9P0J0 144 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 APOBEC2Q9Y235 224 aaKnown RBP8.35□□□□□ -1.07
LINC00954-202ENST00000449086 PCDHB4Q9Y5E5 795 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 PCDHB2Q9Y5E7 798 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 TTLL13PA6NNM8 815 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 H3BSA7 217 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 GPR182O15218 404 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 PEX1O43933 1283 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 CST8O60676 142 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 EFCAB14O75071 495 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 GNA15P30679 374 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 NPTX2P47972 431 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 SFSWAPQ12872 951 aaKnown RBP8.35□□□□□ -1.07
LINC00954-202ENST00000449086 KCTD21Q4G0X4 260 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 HSF5Q4G112 596 aaPredicted RBP8.35□□□□□ -1.07
LINC00954-202ENST00000449086 PPP6R3Q5H9R7 873 aaPredicted RBP8.35□□□□□ -1.07
LINC00954-202ENST00000449086 WDR44Q5JSH3 913 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 TMC7Q7Z402 723 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 WDR75Q8IWA0 830 aaKnown RBP8.35□□□□□ -1.07
LINC00954-202ENST00000449086 RNF148Q8N7C7 305 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 DEPTORQ8TB45 409 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 NLRP7Q8WX94 980 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 FAM213AQ9BRX8 229 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 FTHL17Q9BXU8 183 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 C20orf27Q9GZN8 174 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 PPCSQ9HAB8 311 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 PCDH9Q9HC56 1237 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 GPAMQ9HCL2 828 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 TMEM8AQ9HCN3 771 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 SSU72Q9NP77 194 aaKnown RBP8.35□□□□□ -1.07
LINC00954-202ENST00000449086 AVENQ9NQS1 362 aaPredicted RBP8.35□□□□□ -1.07
LINC00954-202ENST00000449086 CHST12Q9NRB3 414 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 PRMT7Q9NVM4 692 aaPredicted RBP8.35□□□□□ -1.07
LINC00954-202ENST00000449086 MAD1L1Q9Y6D9 718 aa8.35□□□□□ -1.07
LINC00954-202ENST00000449086 TRIP12Q14669 1992 aaPredicted RBP8.34□□□□□ -1.07
LINC00954-202ENST00000449086 HNRNPDLO14979 420 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms