RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 CSHL1Q14406 222 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 MCOLN3Q8TDD5 553 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 MAGEB10Q96LZ2 347 aaPredicted RBP16.21■□□□□ 0.19
PTPN13-204ENST00000436978 OSGEPQ9NPF4 335 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 ZSCAN32Q9NX65 697 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 DNMT3LQ9UJW3 386 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 MAP3K6O95382 1288 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 HOXA10P31260 410 aaPredicted RBP16.21■□□□□ 0.19
PTPN13-204ENST00000436978 NAA30Q147X3 362 aaPredicted RBP16.21■□□□□ 0.19
PTPN13-204ENST00000436978 LYPLAL1Q5VWZ2 237 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 GPATCH2LQ9NWQ4 482 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 ENDOD1O94919 500 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 CCDC159P0C7I6 412 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 JAK1P23458 1154 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 NAA20P61599 178 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 CATSPERGQ6ZRH7 1159 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 PARVBQ9HBI1 364 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 CATSPERZQ9NTU4 200 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 KLHL20Q9Y2M5 609 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 TRDMT1O14717 391 aaKnown RBP16.21■□□□□ 0.19
PTPN13-204ENST00000436978 SERPINA4P29622 427 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 SLC1A6P48664 564 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 FKBP1BP68106 108 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 TFAP2DQ7Z6R9 452 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 LGI2Q8N0V4 545 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 ZNF655Q8N720 491 aaPredicted RBP16.21■□□□□ 0.19
PTPN13-204ENST00000436978 SLC39A8Q9C0K1 460 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 CYP4F12Q9HCS2 524 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 RGS18Q9NS28 235 aa16.21■□□□□ 0.19
PTPN13-204ENST00000436978 USP17L7P0C7H9 530 aa16.21■□□□□ 0.18
PTPN13-204ENST00000436978 IRAK1P51617 712 aa16.21■□□□□ 0.18
PTPN13-204ENST00000436978 UNC93AQ86WB7 457 aa16.21■□□□□ 0.18
PTPN13-204ENST00000436978 EMC1Q8N766 993 aa16.21■□□□□ 0.18
PTPN13-204ENST00000436978 B3GALNT2Q8NCR0 500 aa16.21■□□□□ 0.18
PTPN13-204ENST00000436978 KAT2BQ92831 832 aa16.21■□□□□ 0.18
PTPN13-204ENST00000436978 POLR1EQ9GZS1 481 aaKnown RBP16.2■□□□□ 0.18
PTPN13-204ENST00000436978 PNMA8BQ9ULN7 279 aaPredicted RBP16.2■□□□□ 0.18
PTPN13-204ENST00000436978 TFR2Q9UP52 801 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 SNX8Q9Y5X2 465 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 TATDN2Q93075 761 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 GLIS2Q9BZE0 524 aaPredicted RBP16.2■□□□□ 0.18
PTPN13-204ENST00000436978 DDX28Q9NUL7 540 aaKnown RBP16.2■□□□□ 0.18
PTPN13-204ENST00000436978 GPRC5DQ9NZD1 345 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 CAPN6Q9Y6Q1 641 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 SLC15A5A6NIM6 579 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 RECQL4O94761 1208 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 SKIV2L2P42285 1042 aaKnown RBP16.2■□□□□ 0.18
PTPN13-204ENST00000436978 MAPK8P45983 427 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 C16orf72Q14CZ0 275 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 GSTA3Q16772 222 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 OR56A4Q8NGH8 313 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 ACTL9Q8TC94 416 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 TINF2Q9BSI4 451 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 CYP39A1Q9NYL5 469 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 FAM153AQ9UHL3 310 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 MYH10P35580 1976 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 NDUFB5O43674 189 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 ZNF23P17027 643 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 SOX11P35716 441 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 C2CD6Q53TS8 623 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 ARMC12Q5T9G4 340 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 CES5AQ6NT32 575 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 CDK20Q8IZL9 346 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 FBXO39Q8N4B4 442 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 SOX10P56693 466 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 NR6A1Q15406 480 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 PDGFDQ9GZP0 370 aaPredicted RBP16.2■□□□□ 0.18
PTPN13-204ENST00000436978 AKAP7Q9P0M2 348 aaPredicted RBP16.2■□□□□ 0.18
PTPN13-204ENST00000436978 TFE3P19532 575 aaPredicted RBP16.2■□□□□ 0.18
PTPN13-204ENST00000436978 CDK7P50613 346 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 SPDYCQ5MJ68 293 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 SCUBE3Q8IX30 993 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 CCDC33Q8N5R6 958 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 INPP5DQ92835 1189 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 ADAM30Q9UKF2 790 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 MRPS35P82673 323 aaKnown RBP16.2■□□□□ 0.18
PTPN13-204ENST00000436978 MAPRE3Q9UPY8 281 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 AP3M1Q9Y2T2 418 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 TRIM17Q9Y577 477 aa16.2■□□□□ 0.18
PTPN13-204ENST00000436978 COL1A2P08123 1366 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 GUCY1B2O75343 617 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 PTPRAP18433 802 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 CYP20A1Q6UW02 462 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 ERI2A8K979 691 aaKnown RBP16.19■□□□□ 0.18
PTPN13-204ENST00000436978 LTFP02788 710 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 RPL9P32969 192 aaKnown RBP16.19■□□□□ 0.18
PTPN13-204ENST00000436978 ATP5C1P36542 298 aaKnown RBP16.19■□□□□ 0.18
PTPN13-204ENST00000436978 C1DQ13901 141 aaKnown RBP16.19■□□□□ 0.18
PTPN13-204ENST00000436978 GNA13Q14344 377 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 TMEM154Q6P9G4 183 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 IL22Q9GZX6 179 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 LOC100653049A0A140TA62 436 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 WDR27A2RRH5 827 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 CCNT2O60583 730 aaKnown RBP16.19■□□□□ 0.18
PTPN13-204ENST00000436978 KRT34O76011 436 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 AQP5P55064 265 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 KATNAL2Q8IYT4 538 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 NKX2-3Q8TAU0 364 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 KPNA5O15131 536 aa16.19■□□□□ 0.18
PTPN13-204ENST00000436978 PLSCR1O15162 318 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms