RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 NSMCE4AQ9NXX6 385 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 HES2Q9Y543 173 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 TRPC5OSA6NMA1 111 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 S100BP04271 92 aaPredicted RBP12.95□□□□□ -0.34
CPNE4-201ENST00000429747 MAP3K7CLP57077 242 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 CSHL1Q14406 222 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 INPP5AQ14642 412 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 SV2CQ496J9 727 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 FBXO47Q5MNV8 452 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 GRTP1Q5TC63 336 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 VWA5B1Q5TIE3 1220 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 KIAA0319LQ8IZA0 1049 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 DIS3LQ8TF46 1054 aaKnown RBP12.95□□□□□ -0.34
CPNE4-201ENST00000429747 OSMRQ99650 979 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 GRIP2Q9C0E4 1043 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 LHX5Q9H2C1 402 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 PRDM12Q9H4Q4 367 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 SSU72Q9NP77 194 aaKnown RBP12.95□□□□□ -0.34
CPNE4-201ENST00000429747 SORCS3Q9UPU3 1222 aa12.95□□□□□ -0.34
CPNE4-201ENST00000429747 CLUHO75153 1309 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 SIPA1L3O60292 1781 aaPredicted RBP12.94□□□□□ -0.34
CPNE4-201ENST00000429747 AP3B1O00203 1094 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 PEX1O43933 1283 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 COX4I1P13073 169 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 PEX6Q13608 980 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 FAM83EQ2M2I3 478 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 GRAMD4Q6IC98 578 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 CYP2R1Q6VVX0 501 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 MARK2Q7KZI7 788 aaKnown RBP12.94□□□□□ -0.34
CPNE4-201ENST00000429747 WDR60Q8WVS4 1066 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 EDEM1Q92611 657 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 OPTNQ96CV9 577 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 PTPRJQ12913 1337 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 E2F6O75461 281 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 PLK1P53350 603 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 PDK3Q15120 406 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 GSTA3Q16772 222 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 HSDL1Q3SXM5 330 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 PPM1JQ5JR12 505 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 PACS1Q6VY07 963 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 CHSY1Q86X52 802 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 HPS6Q86YV9 775 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 ADGRF2Q8IZF7 708 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 FNIP1Q8TF40 1166 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 PPP1R13LQ8WUF5 828 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 PHF21BQ96EK2 531 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 CERS2Q96G23 380 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 TRAPPC9Q96Q05 1148 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 CPNE1Q99829 537 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 ATXN3LQ9H3M9 355 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 KRT82Q9NSB4 513 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 TNFSF13BQ9Y275 285 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 SH3BP5O60239 455 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 SNX2O60749 519 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 LYNP07948 512 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 ME2P23368 584 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 EPHA3P29320 983 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 ARL2P36404 184 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 ALDH1A3P47895 512 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 SLC26A2P50443 739 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 PRKAA1Q13131 559 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 PPP1R26Q5T8A7 1209 aaPredicted RBP12.94□□□□□ -0.34
CPNE4-201ENST00000429747 TMC7Q7Z402 723 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 PCDH20Q8N6Y1 951 aaKnown RBP12.94□□□□□ -0.34
CPNE4-201ENST00000429747 DCAKDQ8WVC6 231 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 NCLNQ969V3 563 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 ZNF333Q96JL9 665 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 C7orf26Q96N11 449 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 EBF4Q9BQW3 602 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 SIKE1Q9BRV8 207 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 SPON2Q9BUD6 331 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 NCKIPSDQ9NZQ3 722 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 NENFQ9UMX5 172 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 NR2E3Q9Y5X4 410 aa12.94□□□□□ -0.34
CPNE4-201ENST00000429747 DDHD2O94830 711 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 VAPBO95292 243 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 FAM58BPP0C7Q3 252 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 GABRB2P47870 512 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 TKTL1P51854 596 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 NRF1Q16656 503 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 GJC2Q5T442 439 aaPredicted RBP12.93□□□□□ -0.34
CPNE4-201ENST00000429747 CATSPERGQ6ZRH7 1159 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 C1orf127Q8N9H9 656 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 ZNF670Q9BS34 389 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 SEMA6AQ9H2E6 1030 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 PCDHGC3Q9UN70 934 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 TIMM13Q9Y5L4 95 aaPredicted RBP12.93□□□□□ -0.34
CPNE4-201ENST00000429747 ZNF536O15090 1300 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 MYH11P35749 1972 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 H3BRB1 525 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 BIRC5O15392 142 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 CTSHP09668 335 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 TSPY1Q01534 308 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 TTC33Q6PID6 262 aaPredicted RBP12.93□□□□□ -0.34
CPNE4-201ENST00000429747 NR1H4Q96RI1 486 aaPredicted RBP12.93□□□□□ -0.34
CPNE4-201ENST00000429747 TUT1Q9H6E5 874 aaKnown RBP12.93□□□□□ -0.34
CPNE4-201ENST00000429747 PRKAG3Q9UGI9 489 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 PSMD3O43242 534 aa12.93□□□□□ -0.34
CPNE4-201ENST00000429747 ATP5BP06576 529 aaKnown RBP12.93□□□□□ -0.34
CPNE4-201ENST00000429747 CSH1P0DML2 217 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms