RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 DDX50Q9BQ39 737 aaKnown RBP15□□□□□ -0.01
PAF1-202ENST00000416728 BTBD1Q9H0C5 482 aa15□□□□□ -0.01
PAF1-202ENST00000416728 C6orf106Q9H6K1 298 aaPredicted RBP15□□□□□ -0.01
PAF1-202ENST00000416728 PRSS16Q9NQE7 514 aa15□□□□□ -0.01
PAF1-202ENST00000416728 TM7SF3Q9NS93 570 aa15□□□□□ -0.01
PAF1-202ENST00000416728 STIM2Q9P246 746 aa15□□□□□ -0.01
PAF1-202ENST00000416728 MAN1B1Q9UKM7 699 aa15□□□□□ -0.01
PAF1-202ENST00000416728 PCOLCE2Q9UKZ9 415 aa15□□□□□ -0.01
PAF1-202ENST00000416728 APOBEC2Q9Y235 224 aaKnown RBP15□□□□□ -0.01
PAF1-202ENST00000416728 ZBTB32Q9Y2Y4 487 aaPredicted RBP15□□□□□ -0.01
PAF1-202ENST00000416728 A0A1B0GVT2 93 aa14.99□□□□□ -0.01
PAF1-202ENST00000416728 SEMA4FO95754 770 aa14.99□□□□□ -0.01
PAF1-202ENST00000416728 C7P10643 843 aa14.99□□□□□ -0.01
PAF1-202ENST00000416728 CD44P16070 742 aaKnown RBP14.99□□□□□ -0.01
PAF1-202ENST00000416728 SLC6A4P31645 630 aa14.99□□□□□ -0.01
PAF1-202ENST00000416728 CD70P32970 193 aa14.99□□□□□ -0.01
PAF1-202ENST00000416728 RPS14P62263 151 aaKnown RBP14.99□□□□□ -0.01
PAF1-202ENST00000416728 BNC1Q01954 994 aa14.99□□□□□ -0.01
PAF1-202ENST00000416728 GCNT1Q02742 428 aa14.99□□□□□ -0.01
PAF1-202ENST00000416728 HLA-BQ31612 363 aa14.99□□□□□ -0.01
PAF1-202ENST00000416728 TTC31Q49AM3 519 aaPredicted RBP14.99□□□□□ -0.01
PAF1-202ENST00000416728 TTI2Q6NXR4 508 aa14.99□□□□□ -0.01
PAF1-202ENST00000416728 RRAGAQ7L523 313 aa14.99□□□□□ -0.01
PAF1-202ENST00000416728 HJURPQ8NCD3 748 aaPredicted RBP14.99□□□□□ -0.01
PAF1-202ENST00000416728 C1orf216Q8TAB5 229 aa14.99□□□□□ -0.01
PAF1-202ENST00000416728 LMO3Q8TAP4 145 aa14.99□□□□□ -0.01
PAF1-202ENST00000416728 AZIN2Q96A70 460 aa14.99□□□□□ -0.01
PAF1-202ENST00000416728 MIS12Q9H081 205 aa14.99□□□□□ -0.01
PAF1-202ENST00000416728 SUN2Q9UH99 717 aa14.99□□□□□ -0.01
PAF1-202ENST00000416728 FNDC3AQ9Y2H6 1198 aaKnown RBP14.99□□□□□ -0.01
PAF1-202ENST00000416728 SART1O43290 800 aaKnown RBP14.98□□□□□ -0.01
PAF1-202ENST00000416728 CBFA2T3O75081 653 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 CALCAP01258 141 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 CSNK1EP49674 416 aaKnown RBP14.98□□□□□ -0.01
PAF1-202ENST00000416728 ST8SIA6P61647 398 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 NUCB2P80303 420 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 TEAD4Q15561 434 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 ZNF776Q68DI1 518 aaPredicted RBP14.98□□□□□ -0.01
PAF1-202ENST00000416728 GLRX5Q86SX6 157 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 ARHGEF19Q8IW93 802 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 CCDC117Q8IWD4 279 aaPredicted RBP14.98□□□□□ -0.01
PAF1-202ENST00000416728 PNPLA1Q8N8W4 532 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 FIBINQ8TAL6 211 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 DQX1Q8TE96 717 aaKnown RBP14.98□□□□□ -0.01
PAF1-202ENST00000416728 FAM149B1Q96BN6 582 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 PRICKLE1Q96MT3 831 aaPredicted RBP14.98□□□□□ -0.01
PAF1-202ENST00000416728 SERPINB11Q96P15 392 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 ST7Q9NRC1 585 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 CKAP5Q14008 2032 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 BICDL2A1A5D9 508 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 FSBPO95073 299 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 ASLP04424 464 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 GRIA4P48058 902 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 NNTQ13423 1086 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 CDH18Q13634 790 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 BECN1Q14457 450 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 NADSYN1Q6IA69 706 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 FOXR2Q6PJQ5 311 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 SCUBE3Q8IX30 993 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 ELOA2Q8IYF1 753 aaPredicted RBP14.98□□□□□ -0.01
PAF1-202ENST00000416728 EHBP1Q8NDI1 1231 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 NELFBQ8WX92 580 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 TTC17Q96AE7 1141 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 BIRC7Q96CA5 298 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 FCRL2Q96LA5 508 aaPredicted RBP14.98□□□□□ -0.01
PAF1-202ENST00000416728 TRIM62Q9BVG3 475 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 SGK2Q9HBY8 427 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 TM9SF3Q9HD45 589 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 OSGEPQ9NPF4 335 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 TLR6Q9Y2C9 796 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 PCDHGB2Q9Y5G2 931 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 SLCO1B1Q9Y6L6 691 aa14.98□□□□□ -0.01
PAF1-202ENST00000416728 CHD6Q8TD26 2715 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 ASPMQ8IZT6 3477 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 FLRT2O43155 660 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 MOCS2O96007 188 aaPredicted RBP14.97□□□□□ -0.01
PAF1-202ENST00000416728 FYNP06241 537 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 KRT5P13647 590 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 CD27P26842 260 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 CSKP41240 450 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 GPD2P43304 727 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 ACADSBP45954 432 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 RPS24P62847 133 aaKnown RBP14.97□□□□□ -0.01
PAF1-202ENST00000416728 KCNH2Q12809 1159 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 SUZ12Q15022 739 aaKnown RBP14.97□□□□□ -0.01
PAF1-202ENST00000416728 KIF19Q2TAC6 998 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 TRIM59Q8IWR1 403 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 CARNMT1Q8N4J0 409 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 RHBDD1Q8TEB9 315 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 GANCQ8TET4 914 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 LMLNQ96KR4 655 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 KREMEN1Q96MU8 473 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 CDC6Q99741 560 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 NUCKS1Q9H1E3 243 aaKnown RBP14.97□□□□□ -0.01
PAF1-202ENST00000416728 RSPH9Q9H1X1 276 aaPredicted RBP14.97□□□□□ -0.01
PAF1-202ENST00000416728 MTG2Q9H4K7 406 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 SCML1Q9UN30 329 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 CTNND2Q9UQB3 1225 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 NAALADL1Q9UQQ1 740 aa14.97□□□□□ -0.01
PAF1-202ENST00000416728 NCKAP1Q9Y2A7 1128 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms