RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 IGLV3-10A0A075B6K4 115 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 TYW5A2RUC4 315 aaKnown RBP17.17■□□□□ 0.34
SUMO1-208ENST00000409627 OTOL1A6NHN0 477 aaPredicted RBP17.17■□□□□ 0.34
SUMO1-208ENST00000409627 E9PAM4 449 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 PSTPIP1O43586 416 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 PENKP01210 267 aaPredicted RBP17.17■□□□□ 0.34
SUMO1-208ENST00000409627 L1CAMP32004 1257 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 GGCXP38435 758 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 ZNF135P52742 658 aaPredicted RBP17.17■□□□□ 0.34
SUMO1-208ENST00000409627 SEMA3BQ13214 749 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 DPYSL2Q16555 572 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 SMTNL2Q2TAL5 461 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 KCNT1Q5JUK3 1230 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 RABGAP1LQ5R372 815 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 MPP7Q5T2T1 576 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 ARTNQ5T4W7 220 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 MANEALQ5VSG8 457 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 TTC39BQ5VTQ0 682 aaPredicted RBP17.17■□□□□ 0.34
SUMO1-208ENST00000409627 FYB2Q5VWT5 728 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 RNF43Q68DV7 783 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 LRRC31Q6UY01 552 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 C14orf80Q86SX3 495 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 TMEM25Q86YD3 366 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 RHOT1Q8IXI2 618 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 UBALD2Q8IYN6 164 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 CD101Q93033 1021 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 TRIM44Q96DX7 344 aaPredicted RBP17.17■□□□□ 0.34
SUMO1-208ENST00000409627 TMA16Q96EY4 203 aaKnown RBP17.17■□□□□ 0.34
SUMO1-208ENST00000409627 MYEOVQ96EZ4 313 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 ALS2CR12Q96Q35 445 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 UHRF1Q96T88 793 aaPredicted RBP17.17■□□□□ 0.34
SUMO1-208ENST00000409627 DHX35Q9H5Z1 703 aaKnown RBP17.17■□□□□ 0.34
SUMO1-208ENST00000409627 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.17■□□□□ 0.34
SUMO1-208ENST00000409627 GPATCH2LQ9NWQ4 482 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 TRMT1Q9NXH9 659 aaKnown RBP17.17■□□□□ 0.34
SUMO1-208ENST00000409627 VANGL2Q9ULK5 521 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 SNX10Q9Y5X0 201 aa17.17■□□□□ 0.34
SUMO1-208ENST00000409627 DRGXA6NNA5 263 aa17.16■□□□□ 0.34
SUMO1-208ENST00000409627 TRDMT1O14717 391 aaKnown RBP17.16■□□□□ 0.34
SUMO1-208ENST00000409627 TSPAN3O60637 253 aa17.16■□□□□ 0.34
SUMO1-208ENST00000409627 HTR7P34969 479 aa17.16■□□□□ 0.34
SUMO1-208ENST00000409627 SGSHP51688 502 aa17.16■□□□□ 0.34
SUMO1-208ENST00000409627 CA9Q16790 459 aa17.16■□□□□ 0.34
SUMO1-208ENST00000409627 ANO4Q32M45 955 aa17.16■□□□□ 0.34
SUMO1-208ENST00000409627 NT5DC3Q86UY8 548 aa17.16■□□□□ 0.34
SUMO1-208ENST00000409627 PYROXD2Q8N2H3 581 aa17.16■□□□□ 0.34
SUMO1-208ENST00000409627 TRIM58Q8NG06 486 aa17.16■□□□□ 0.34
SUMO1-208ENST00000409627 DDI1Q8WTU0 396 aa17.16■□□□□ 0.34
SUMO1-208ENST00000409627 UBE2Q2Q8WVN8 375 aa17.16■□□□□ 0.34
SUMO1-208ENST00000409627 HSPH1Q92598 858 aa17.16■□□□□ 0.34
SUMO1-208ENST00000409627 P2RY11Q96G91 374 aa17.16■□□□□ 0.34
SUMO1-208ENST00000409627 RPRD1AQ96P16 312 aaPredicted RBP17.16■□□□□ 0.34
SUMO1-208ENST00000409627 KCTD15Q96SI1 283 aaPredicted RBP17.16■□□□□ 0.34
SUMO1-208ENST00000409627 EPAS1Q99814 870 aa17.16■□□□□ 0.34
SUMO1-208ENST00000409627 BBS2Q9BXC9 721 aa17.16■□□□□ 0.34
SUMO1-208ENST00000409627 MAGEB5Q9BZ81 275 aa17.16■□□□□ 0.34
SUMO1-208ENST00000409627 PPARGC1AQ9UBK2 798 aaKnown RBP17.16■□□□□ 0.34
SUMO1-208ENST00000409627 AMFRQ9UKV5 643 aa17.16■□□□□ 0.34
SUMO1-208ENST00000409627 NEU3Q9UQ49 428 aa17.16■□□□□ 0.34
SUMO1-208ENST00000409627 USP27XA6NNY8 438 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 NEDD8-MDP1E9PL57 170 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 FAM72CH0Y354 149 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 CACNG3O60359 315 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 LRIG2O94898 1065 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 TYRP14679 529 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 GLULP15104 373 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 HOXD9P28356 352 aaPredicted RBP17.15■□□□□ 0.34
SUMO1-208ENST00000409627 HOXC13P31276 330 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 GJA4P35212 333 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 GJC1P36383 396 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 RPS24P62847 133 aaKnown RBP17.15■□□□□ 0.34
SUMO1-208ENST00000409627 GAB4Q2WGN9 574 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 FAM72AQ5TYM5 149 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 FAM72DQ6L9T8 149 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 PEX26Q7Z412 305 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 FAM72BQ86X60 149 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 FAM71BQ8TC56 605 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 IGSF8Q969P0 613 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 TBC1D31Q96DN5 1066 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 MSANTD3Q96H12 275 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 RETREG1Q9H6L5 497 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 C8orf33Q9H7E9 229 aaPredicted RBP17.15■□□□□ 0.34
SUMO1-208ENST00000409627 DDX56Q9NY93 547 aaKnown RBP17.15■□□□□ 0.34
SUMO1-208ENST00000409627 MUTYHQ9UIF7 546 aa17.15■□□□□ 0.34
SUMO1-208ENST00000409627 A0A1B0GVM2 712 aa17.14■□□□□ 0.33
SUMO1-208ENST00000409627 CCDC66A2RUB6 948 aa17.14■□□□□ 0.33
SUMO1-208ENST00000409627 TCAF2A6NFQ2 919 aa17.14■□□□□ 0.33
SUMO1-208ENST00000409627 CREB3O43889 395 aa17.14■□□□□ 0.33
SUMO1-208ENST00000409627 TBL1XO60907 577 aa17.14■□□□□ 0.33
SUMO1-208ENST00000409627 SRGAP2O75044 1071 aa17.14■□□□□ 0.33
SUMO1-208ENST00000409627 CTNNA2P26232 953 aa17.14■□□□□ 0.33
SUMO1-208ENST00000409627 CTNNA1P35221 906 aaKnown RBP17.14■□□□□ 0.33
SUMO1-208ENST00000409627 EIF2DP41214 584 aaKnown RBP17.14■□□□□ 0.33
SUMO1-208ENST00000409627 ARSEP51690 589 aa17.14■□□□□ 0.33
SUMO1-208ENST00000409627 AMPD2Q01433 879 aa17.14■□□□□ 0.33
SUMO1-208ENST00000409627 PDK2Q15119 407 aa17.14■□□□□ 0.33
SUMO1-208ENST00000409627 ATP13A4Q4VNC1 1196 aa17.14■□□□□ 0.33
SUMO1-208ENST00000409627 PPP6R3Q5H9R7 873 aaPredicted RBP17.14■□□□□ 0.33
SUMO1-208ENST00000409627 CHST9Q7L1S5 443 aa17.14■□□□□ 0.33
SUMO1-208ENST00000409627 ETFBKMTQ8IXQ9 262 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms