RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 ACVR1CQ8NER5 493 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 HTR3CQ8WXA8 447 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 C12orf42Q96LP6 360 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 SH3GL3Q99963 347 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 ELP3Q9H9T3 547 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 GOLGA2P5Q9HBQ8 144 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 SCN1AP35498 2009 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 LAMA2P24043 3122 aaKnown RBP12.32□□□□□ -0.44
RBM39-206ENST00000403542 MCM3APO60318 1980 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 RLFQ13129 1914 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 IGKV6-21A0A0C4DH24 114 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 MYOCOSA0A1B0GUC4 107 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 PLIN3O60664 434 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 PGM3O95394 542 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 CCNFP41002 786 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 GLRBP48167 497 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 RBP5P82980 135 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 ACAP1Q15027 740 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 PPM1LQ5SGD2 360 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 SPATA6LQ8N4H0 392 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 ZNF781Q8N8C0 355 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 OR52K1Q8NGK4 314 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 PPP4R1Q8TF05 950 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 GCNAQ96QF7 691 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 MTMR10Q9NXD2 777 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 CACNG4Q9UBN1 327 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 ZNF112Q9UJU3 913 aa12.32□□□□□ -0.44
RBM39-206ENST00000403542 SOCS7O14512 581 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 RALBP11234 206 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 RAG1P15918 1043 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 TCN1P20061 433 aaPredicted RBP12.31□□□□□ -0.44
RBM39-206ENST00000403542 TUBB3Q13509 450 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 CCNIQ14094 377 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 SLC9B1Q4ZJI4 515 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 DCAF6Q58WW2 860 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 NCBP2-AS2Q69YL0 99 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 NAPRTQ6XQN6 538 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 MAPK15Q8TD08 544 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 GDPD5Q8WTR4 605 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 TFB1MQ8WVM0 346 aaKnown RBP12.31□□□□□ -0.44
RBM39-206ENST00000403542 S100A14Q9HCY8 104 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 ZBTB14O43829 449 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 AHCYL1O43865 530 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 OR6B1O95007 311 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 HMGB2P26583 209 aaKnown RBP12.31□□□□□ -0.44
RBM39-206ENST00000403542 GSTT1P30711 240 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 BAG6P46379 1132 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 WASHC5Q12768 1159 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 PID1Q7Z2X4 250 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 DNAAF3Q8N9W5 541 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 USP13Q92995 863 aaPredicted RBP12.31□□□□□ -0.44
RBM39-206ENST00000403542 ATP2A3Q93084 1043 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 P2RY11Q96G91 374 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 SORT1Q99523 831 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 CDH22Q9UJ99 828 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 PCDHGB4Q9UN71 923 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 PCDHGB5Q9Y5G0 923 aa12.31□□□□□ -0.44
RBM39-206ENST00000403542 CAPN8A6NHC0 703 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 CLDN5O00501 218 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 C22orf31O95567 290 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 CHRNGP07510 517 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 AVPR1AP37288 418 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 NDUFV1P49821 464 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 HSP90AA5PQ58FG0 334 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 DHDDSQ86SQ9 333 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 OR6Y1Q8NGX8 325 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 FCRL3Q96P31 734 aaPredicted RBP12.3□□□□□ -0.44
RBM39-206ENST00000403542 OR52B2Q96RD2 323 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 COG4Q9H9E3 785 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 PRMT7Q9NVM4 692 aaPredicted RBP12.3□□□□□ -0.44
RBM39-206ENST00000403542 MOCS1Q9NZB8 636 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 FIS1Q9Y3D6 152 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 HSPA4LO95757 839 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 LTFP02788 710 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 EDNRBP24530 442 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 ACAT1P24752 427 aaKnown RBP12.3□□□□□ -0.44
RBM39-206ENST00000403542 PKNOX1P55347 436 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 TBL3Q12788 808 aaKnown RBP12.3□□□□□ -0.44
RBM39-206ENST00000403542 CWF19L1Q69YN2 538 aaKnown RBP12.3□□□□□ -0.44
RBM39-206ENST00000403542 DCLK2Q8N568 766 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 SLC2A14Q8TDB8 520 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 SLC35F5Q8WV83 523 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 ARNTL2Q8WYA1 636 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 CDKL2Q92772 493 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 ZNF669Q96BR6 464 aaPredicted RBP12.3□□□□□ -0.44
RBM39-206ENST00000403542 RTP4Q96DX8 246 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 MFSD3Q96ES6 412 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 IFT43Q96FT9 208 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 ZNF670Q9BS34 389 aa12.3□□□□□ -0.44
RBM39-206ENST00000403542 EIF2AQ9BY44 585 aaKnown RBP12.3□□□□□ -0.44
RBM39-206ENST00000403542 F8W8V4 182 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 BUD23O43709 281 aaKnown RBP12.29□□□□□ -0.44
RBM39-206ENST00000403542 GCATO75600 419 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 USP2O75604 605 aaPredicted RBP12.29□□□□□ -0.44
RBM39-206ENST00000403542 SNUPNO95149 360 aaKnown RBP12.29□□□□□ -0.44
RBM39-206ENST00000403542 PRKCGP05129 697 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 TGFB3P10600 412 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 IGFBP6P24592 240 aaPredicted RBP12.29□□□□□ -0.44
RBM39-206ENST00000403542 EPHA3P29320 983 aa12.29□□□□□ -0.44
RBM39-206ENST00000403542 MAGEA3P43357 314 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms