RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 HPS6Q86YV9 775 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 BBOF1Q8ND07 529 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 OR6B3Q8NGW1 331 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 RAB3IL1Q8TBN0 382 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 SLC10A4Q96EP9 437 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 ABHD8Q96I13 439 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 CORO1BQ9BR76 489 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 EIF2AQ9BY44 585 aaKnown RBP10.25□□□□□ -0.77
PSEN1-204ENST00000394164 SLC13A1Q9BZW2 595 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 GOLGA2P5Q9HBQ8 144 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 STRIP2Q9ULQ0 834 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 PROCP04070 461 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 ABHD2P08910 425 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 GPD2P43304 727 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 GJA8P48165 433 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 RXRGP48443 463 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 MTTPP55157 894 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 SH3BGRP55822 239 aaPredicted RBP10.25□□□□□ -0.77
PSEN1-204ENST00000394164 BTG3Q14201 252 aaPredicted RBP10.25□□□□□ -0.77
PSEN1-204ENST00000394164 GRM2Q14416 872 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 LPIN1Q14693 890 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 PRKD1Q15139 912 aaPredicted RBP10.25□□□□□ -0.77
PSEN1-204ENST00000394164 CA9Q16790 459 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 C6orf52Q5T4I8 152 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 PMF1Q6P1K2 205 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 RSPH3Q86UC2 560 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 CTAGE3PQ8IX95 158 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 BANPQ8N9N5 519 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 OSMRQ99650 979 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 CCDC28BQ9BUN5 200 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 DPEP3Q9H4B8 488 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 ARMC7Q9H6L4 198 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 PCDH18Q9HCL0 1135 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 RABGEF1Q9UJ41 708 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 PCDHGC3Q9UN70 934 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 DTNAQ9Y4J8 743 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 TRIP11Q15643 1979 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 CLUHO75153 1309 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 TRMUO75648 421 aaKnown RBP10.25□□□□□ -0.77
PSEN1-204ENST00000394164 KRT7P08729 469 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 LCP1P13796 627 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 SULT2A1Q06520 285 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 HNRNPDQ14103 355 aaKnown RBP10.25□□□□□ -0.77
PSEN1-204ENST00000394164 SURF1Q15526 300 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 TMCO4Q5TGY1 634 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 ARMCX6Q7L4S7 300 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.25□□□□□ -0.77
PSEN1-204ENST00000394164 GSDMBQ8TAX9 411 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 LZICQ8WZA0 190 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 TMIGD2Q96BF3 282 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 ZMAT2Q96NC0 199 aaKnown RBP10.25□□□□□ -0.77
PSEN1-204ENST00000394164 SLX1AQ9BQ83 275 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 WDR83Q9BRX9 315 aaKnown RBP10.25□□□□□ -0.77
PSEN1-204ENST00000394164 CEP41Q9BYV8 373 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 ANLNQ9NQW6 1124 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 PRMT7Q9NVM4 692 aaPredicted RBP10.25□□□□□ -0.77
PSEN1-204ENST00000394164 DDX56Q9NY93 547 aaKnown RBP10.25□□□□□ -0.77
PSEN1-204ENST00000394164 MRPL42Q9Y6G3 142 aaKnown RBP10.25□□□□□ -0.77
PSEN1-204ENST00000394164 RGPD3A6NKT7 1758 aaPredicted RBP10.25□□□□□ -0.77
PSEN1-204ENST00000394164 RGPD4Q7Z3J3 1758 aa10.25□□□□□ -0.77
PSEN1-204ENST00000394164 DNAJC25-GNG10A0A024R161 153 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 CAPN14A8MX76 684 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 I3L4J1 428 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 MCF2LO15068 1137 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 KCNN4O15554 427 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 PRPSAP2O60256 369 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 HMGCRP04035 888 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 ENTPD1P49961 510 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 FAAP100Q0VG06 881 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 ZNF618Q5T7W0 954 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 BSPRYQ5W0U4 402 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 CES4AQ5XG92 561 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 CDHR3Q6ZTQ4 885 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.24□□□□□ -0.77
PSEN1-204ENST00000394164 SLC35B2Q8TB61 432 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 GIPC3Q8TF64 312 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 ZNF518BQ9C0D4 1074 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 RAB6BQ9NRW1 208 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 SCN1AP35498 2009 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 LAMA3Q16787 3333 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 NDC80O14777 642 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 FKBP6O75344 327 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 TRUB2O95900 331 aaKnown RBP10.24□□□□□ -0.77
PSEN1-204ENST00000394164 TOP3BO95985 862 aaKnown RBP10.24□□□□□ -0.77
PSEN1-204ENST00000394164 CCDC130P13994 396 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 ELK3P41970 407 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 OXCT1P55809 520 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 BST1Q10588 318 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 CHI3L2Q15782 390 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 CNGA3Q16281 694 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 CCDC92Q53HC0 331 aaPredicted RBP10.24□□□□□ -0.77
PSEN1-204ENST00000394164 TDRPQ86YL5 185 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 CPNE9Q8IYJ1 553 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 DCUN1D5Q9BTE7 237 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 VPS11Q9H270 941 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 PCDH9Q9HC56 1237 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 TMPRSS4Q9NRS4 437 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 SELENONQ9NZV5 590 aa10.24□□□□□ -0.77
PSEN1-204ENST00000394164 BRCA1P38398 1863 aaKnown RBP10.23□□□□□ -0.77
PSEN1-204ENST00000394164 PTPRFP10586 1907 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms