RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 SETD3Q86TU7 594 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-203ENST00000393287 EIF1ADQ8N9N8 165 aaKnown RBP8.31□□□□□ -1.08
ATXN3-203ENST00000393287 SHDQ96IW2 340 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 AGAP3Q96P47 875 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 NDEL1Q9GZM8 345 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 UBR3Q6ZT12 1888 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 A0A0U1RQF3 1178 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 SNUPNO95149 360 aaKnown RBP8.31□□□□□ -1.08
ATXN3-203ENST00000393287 SYF2O95926 243 aaKnown RBP8.31□□□□□ -1.08
ATXN3-203ENST00000393287 SLCO1A2P46721 670 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 SERPINB4P48594 390 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 ATP1A2P50993 1020 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 ZSWIM2Q8NEG5 633 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 FNIP1Q8TF40 1166 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 SMG7Q92540 1137 aaKnown RBP8.31□□□□□ -1.08
ATXN3-203ENST00000393287 PGLYRP2Q96PD5 576 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 TCF25Q9BQ70 676 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 CFHR5Q9BXR6 569 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 TRABDQ9H4I3 376 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 SLC24A2Q9UI40 661 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 VIRMAQ69YN4 1812 aaKnown RBP8.31□□□□□ -1.08
ATXN3-203ENST00000393287 SUPT3HO75486 399 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 HNRNPH3P31942 346 aaKnown RBP8.31□□□□□ -1.08
ATXN3-203ENST00000393287 GPM6BQ13491 265 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 MTF1Q14872 753 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 PHKG1Q16816 387 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 KCTD13Q8WZ19 329 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 NT5MQ9NPB1 228 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 FAM155AB1AL88 458 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-203ENST00000393287 SUPT3HB4E1H0 165 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 KELP23276 732 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 GAD2Q05329 585 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 MAMLD1Q13495 774 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 SLC25A52Q3SY17 297 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 SUSD3Q96L08 255 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 RBM22Q9NW64 420 aaKnown RBP eCLIP8.31□□□□□ -1.08
ATXN3-203ENST00000393287 PSD3Q9NYI0 1048 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 ARHGAP20Q9P2F6 1191 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 GNEQ9Y223 722 aaKnown RBP8.31□□□□□ -1.08
ATXN3-203ENST00000393287 HES2Q9Y543 173 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 SYN1P17600 705 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 HALP42357 657 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 CLCN6P51797 869 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 MIIPQ5JXC2 388 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 PIGZQ86VD9 579 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 COLGALT1Q8NBJ5 622 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 ZNF669Q96BR6 464 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-203ENST00000393287 TGS1Q96RS0 853 aaKnown RBP8.31□□□□□ -1.08
ATXN3-203ENST00000393287 LATS2Q9NRM7 1088 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 RGS18Q9NS28 235 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 EFR3BQ9Y2G0 817 aa8.31□□□□□ -1.08
ATXN3-203ENST00000393287 CHADO15335 359 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 ACRP10323 421 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 CRABP2P29373 138 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 ARHGDIAP52565 204 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 RCN2Q14257 317 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 ECM1Q16610 540 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 DENND1BQ6P3S1 775 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 C16orf70Q9BSU1 422 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 IRAK2O43187 625 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 CHRM3P20309 590 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 CASP5P51878 434 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 LBRQ14739 615 aaKnown RBP8.3□□□□□ -1.08
ATXN3-203ENST00000393287 EFTUD2Q15029 972 aaKnown RBP eCLIP8.3□□□□□ -1.08
ATXN3-203ENST00000393287 LLGL2Q6P1M3 1020 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 ZNF438Q7Z4V0 828 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 ZNF655Q8N720 491 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-203ENST00000393287 BLOC1S5Q8TDH9 187 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 EDEM1Q92611 657 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 TIFAQ96CG3 184 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 ASB2Q96Q27 587 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 LMAN2LQ9H0V9 348 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 CLCA2Q9UQC9 943 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 TRDMT1O14717 391 aaKnown RBP8.3□□□□□ -1.08
ATXN3-203ENST00000393287 TBL1XO60907 577 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 LLGL1Q15334 1064 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 GLMNQ92990 594 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 CDCA3Q99618 268 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-203ENST00000393287 MRPL45Q9BRJ2 306 aaKnown RBP8.3□□□□□ -1.08
ATXN3-203ENST00000393287 VANGL2Q9ULK5 521 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 MAPRE3Q9UPY8 281 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 A0A087X1B8 175 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 SLCO1B7G3V0H7 640 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 PCDH8O95206 1070 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 ATP4AP20648 1035 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 KDELR1P24390 212 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 OR1D2P34982 312 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 GJA8P48165 433 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 CDH4P55283 916 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 NOMO3P69849 1222 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 DLG4P78352 724 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 SATB1Q01826 763 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 GPR158Q5T848 1215 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 BCAS4Q8TDM0 211 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 OTUB1Q96FW1 271 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-203ENST00000393287 CPNE1Q99829 537 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 OMDQ99983 421 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 CPSF2Q9P2I0 782 aaKnown RBP8.3□□□□□ -1.08
ATXN3-203ENST00000393287 TUBGCP4Q9UGJ1 667 aa8.3□□□□□ -1.08
ATXN3-203ENST00000393287 STARD13Q9Y3M8 1113 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms