RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 PYDC1Q8WXC3 89 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 DNAJC19Q96DA6 116 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 INPP4AQ96PE3 977 aaPredicted RBP13.41□□□□□ -0.26
LCA5-202ENST00000392959 VTA1Q9NP79 307 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 ACP6Q9NPH0 428 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 DDX43Q9NXZ2 648 aaKnown RBP13.41□□□□□ -0.26
LCA5-202ENST00000392959 DSEQ9UL01 958 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 BTNL10A8MVZ5 291 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 RHOCP08134 193 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 DNAJB2P25686 324 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 CCNG1P51959 295 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 RHOAP61586 193 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 KCNJ2P63252 427 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 MRPS22P82650 360 aaKnown RBP13.41□□□□□ -0.26
LCA5-202ENST00000392959 AMPD2Q01433 879 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 SLC6A3Q01959 620 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 ALDH6A1Q02252 535 aaKnown RBP13.41□□□□□ -0.26
LCA5-202ENST00000392959 ZNF467Q7Z7K2 595 aaPredicted RBP13.41□□□□□ -0.26
LCA5-202ENST00000392959 DEFB106AQ8N104 65 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 SEMA4DQ92854 862 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 MIEF2Q96C03 454 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 KIAA1683Q9H0B3 1180 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 ZFYVE28Q9HCC9 887 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 RGS18Q9NS28 235 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 SNTG2Q9NY99 539 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 A0A087WXM4 84 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 C2CD2LO14523 706 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 WBP4O75554 376 aaKnown RBP13.41□□□□□ -0.26
LCA5-202ENST00000392959 DRD4P21917 467 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 KRT20P35900 424 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 CHI3L1P36222 383 aaPredicted RBP13.41□□□□□ -0.26
LCA5-202ENST00000392959 HALP42357 657 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 ALDH7A1P49419 539 aaKnown RBP13.41□□□□□ -0.26
LCA5-202ENST00000392959 NEDD8Q15843 81 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 DUPD1Q68J44 220 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 FIG4Q92562 907 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 FAM163AQ96GL9 167 aaPredicted RBP13.41□□□□□ -0.26
LCA5-202ENST00000392959 TMEM169Q96HH4 297 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 RNF145Q96MT1 663 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 LRRC19Q9H756 370 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 COPS7BQ9H9Q2 264 aaPredicted RBP13.41□□□□□ -0.26
LCA5-202ENST00000392959 RABGEF1Q9UJ41 708 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 VPS28Q9UK41 221 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 ANKRD6Q9Y2G4 727 aa13.41□□□□□ -0.26
LCA5-202ENST00000392959 NWD1Q149M9 1564 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 MEGF6O75095 1541 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 TRIM24O15164 1050 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 PHGDHO43175 533 aaKnown RBP13.4□□□□□ -0.26
LCA5-202ENST00000392959 PARNO95453 639 aaKnown RBP13.4□□□□□ -0.26
LCA5-202ENST00000392959 ETS1P14921 441 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 ZNF157P51786 506 aaPredicted RBP13.4□□□□□ -0.26
LCA5-202ENST00000392959 RAB14P61106 215 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 LRRC38Q5VT99 294 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 FAM45BPQ6NSW5 357 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 KRT78Q8N1N4 520 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 FNDC5Q8NAU1 212 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 LNX1Q8TBB1 728 aaPredicted RBP13.4□□□□□ -0.26
LCA5-202ENST00000392959 SAE1Q9UBE0 346 aaPredicted RBP13.4□□□□□ -0.26
LCA5-202ENST00000392959 E5RJQ4 531 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 PEX1O43933 1283 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 USP12O75317 370 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 CYP1A1P04798 512 aaPredicted RBP13.4□□□□□ -0.26
LCA5-202ENST00000392959 CYP3A4P08684 503 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 VEGFAP15692 232 aaPredicted RBP13.4□□□□□ -0.26
LCA5-202ENST00000392959 PKNOX1P55347 436 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 DLG4P78352 724 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 PDK4Q16654 411 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 LZTR1Q8N653 840 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 ZNF398Q8TD17 642 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 DLG3Q92796 817 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 VAT1Q99536 393 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 C9orf16Q9BUW7 83 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 TAS2R13Q9NYV9 303 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 C6orf203Q9P0P8 240 aaPredicted RBP13.4□□□□□ -0.26
LCA5-202ENST00000392959 C15orf38-AP3S2A0A0A6YYH1 394 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 CBX4O00257 560 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 SYNCRIPO60506 623 aaKnown RBP13.4□□□□□ -0.26
LCA5-202ENST00000392959 ACAT1P24752 427 aaKnown RBP13.4□□□□□ -0.26
LCA5-202ENST00000392959 PLK1P53350 603 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 ILF2Q12905 390 aaKnown RBP13.4□□□□□ -0.26
LCA5-202ENST00000392959 ATP1A4Q13733 1029 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 CTXN3Q4LDR2 81 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 ARPINQ7Z6K5 226 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 HEATR4Q86WZ0 1026 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 EID3Q8N140 333 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 ZSCAN18Q8TBC5 510 aaPredicted RBP13.4□□□□□ -0.26
LCA5-202ENST00000392959 DMAP1Q9NPF5 467 aaPredicted RBP13.4□□□□□ -0.26
LCA5-202ENST00000392959 PCDHB7Q9Y5E2 793 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 FRMPD1Q5SYB0 1578 aa13.4□□□□□ -0.26
LCA5-202ENST00000392959 FAM237BA0A1B0GVD1 139 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 CKMP06732 381 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 CDC25CP30307 473 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 MSLNQ13421 630 aaPredicted RBP13.39□□□□□ -0.27
LCA5-202ENST00000392959 C1DQ13901 141 aaKnown RBP13.39□□□□□ -0.27
LCA5-202ENST00000392959 FAM83AQ86UY5 434 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 OR8H2Q8N162 312 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 METTL6Q8TCB7 284 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 HAS1Q92839 578 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 PTPRHQ9HD43 1115 aa13.39□□□□□ -0.27
LCA5-202ENST00000392959 CYLDQ9NQC7 956 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms