RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 COL20A1Q9P218 1284 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 A0A0A0MRY4 1105 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 TAS2R40P59535 323 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 MRPS6P82932 125 aaKnown RBP13.94□□□□□ -0.18
C9orf47-203ENST00000375851 HGSNATQ68CP4 663 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 SPATA13Q96N96 652 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 SPATA16Q9BXB7 569 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 RNPEPQ9H4A4 650 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 SLC24A3Q9HC58 644 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 SCHIP1Q9P0W5 487 aaPredicted RBP13.94□□□□□ -0.18
C9orf47-203ENST00000375851 SHBGP04278 402 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 PTPN4P29074 926 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 CDK16Q00536 496 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 TTMPQ5BVD1 217 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 ZC3H12AQ5D1E8 599 aaKnown RBP13.94□□□□□ -0.18
C9orf47-203ENST00000375851 DUPD1Q68J44 220 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 ZNF75CPQ92670 426 aaPredicted RBP13.94□□□□□ -0.18
C9orf47-203ENST00000375851 PCDHB18PQ96TA0 734 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 GPR20Q99678 358 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 CPNE1Q99829 537 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 CLCA2Q9UQC9 943 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 GRM5P41594 1212 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 CLK2P49760 499 aaKnown RBP13.94□□□□□ -0.18
C9orf47-203ENST00000375851 TMEM154Q6P9G4 183 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 BNC2Q6ZN30 1099 aaPredicted RBP13.94□□□□□ -0.18
C9orf47-203ENST00000375851 POLNQ7Z5Q5 900 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 BSNDQ8WZ55 320 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 CD248Q9HCU0 757 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 TCF7L2Q9NQB0 619 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 THAP1Q9NVV9 213 aa13.94□□□□□ -0.18
C9orf47-203ENST00000375851 SLC1A6P48664 564 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 PRKAA1Q13131 559 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 MMRN1Q13201 1228 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 MTA1Q13330 715 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 CCDC153Q494R4 210 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 FUT11Q495W5 492 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 LRRC23Q53EV4 343 aaPredicted RBP13.93□□□□□ -0.18
C9orf47-203ENST00000375851 NRDE2Q9H7Z3 1164 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 NID2Q14112 1375 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 C16orf96A6NNT2 1141 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 NOL4O94818 638 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 AUHQ13825 339 aaKnown RBP13.93□□□□□ -0.18
C9orf47-203ENST00000375851 SLC22A9Q8IVM8 553 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 MREGQ8N565 214 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 ALLCQ8N6M5 410 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 LRRC52Q8N7C0 313 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 USP6NLQ92738 828 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 PRDM16Q9HAZ2 1276 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 CDH9Q9ULB4 789 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 TRIM17Q9Y577 477 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 CACNA1FO60840 1977 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 hCG_1818297A0A087WSY0 165 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 CHADO15335 359 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 CABYRO75952 493 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 DUSP28Q4G0W2 176 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 C16orf87Q6PH81 154 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 PRDM12Q9H4Q4 367 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 DCLRE1BQ9H816 532 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 ST3GAL5Q9UNP4 418 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 RBAK-RBAKDNI3L0D1 243 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 FCHO1O14526 889 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 PSMB4P28070 264 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 DMC1Q14565 340 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 ZCWPW2Q504Y3 356 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 LPPQ93052 612 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 C18orf25Q96B23 403 aaPredicted RBP13.93□□□□□ -0.18
C9orf47-203ENST00000375851 RNF208Q9H0X6 261 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 RGS18Q9NS28 235 aa13.93□□□□□ -0.18
C9orf47-203ENST00000375851 UBTFL6P0CB48 400 aaPredicted RBP13.92□□□□□ -0.18
C9orf47-203ENST00000375851 CYP2C18P33260 490 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 CRYBB1P53674 252 aaPredicted RBP13.92□□□□□ -0.18
C9orf47-203ENST00000375851 AGKQ53H12 422 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 LLGL2Q6P1M3 1020 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 ZNF467Q7Z7K2 595 aaPredicted RBP13.92□□□□□ -0.18
C9orf47-203ENST00000375851 NKX2-3Q8TAU0 364 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 TBL1YQ9BQ87 522 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 TMEM39AQ9NV64 488 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 ARHGAP28Q9P2N2 729 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 BLOC1S6Q9UL45 172 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 PNMA8BQ9ULN7 279 aaPredicted RBP13.92□□□□□ -0.18
C9orf47-203ENST00000375851 UBDO15205 165 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 PSTKQ8IV42 348 aaKnown RBP13.92□□□□□ -0.18
C9orf47-203ENST00000375851 ZBTB10Q96DT7 871 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 PLIN4Q96Q06 1357 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 IFT172Q9UG01 1749 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 PEAK1Q9H792 1746 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 ITGAVP06756 1048 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 ERVK-10P10266 1014 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 MMP8P22894 467 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 SOAT1P35610 550 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 PLOD1Q02809 727 aaPredicted RBP13.92□□□□□ -0.18
C9orf47-203ENST00000375851 ZCCHC23Q6ZST2 131 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 OR52K1Q8NGK4 314 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 ZNF556Q9HAH1 456 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 TEKT2Q9UIF3 430 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 PLA2G4CQ9UP65 541 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 DOLKQ9UPQ8 538 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 DTNAQ9Y4J8 743 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 TBC1D4O60343 1298 aa13.92□□□□□ -0.18
C9orf47-203ENST00000375851 B4GALT4O60513 344 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms