RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 SLC6A3Q01959 620 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 CRYMQ14894 314 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 MICU2Q8IYU8 434 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 ACTRT1Q8TDG2 376 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 DUSP9Q99956 384 aaKnown RBP17.53■□□□□ 0.4
MCF2L-203ENST00000375604 CERS4Q9HA82 394 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 LMTK2Q8IWU2 1503 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 SALL1Q9NSC2 1324 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 M0R3G1 203 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 KPNA6O60684 536 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 ADRB2P07550 413 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 POLR2EP19388 210 aaKnown RBP17.53■□□□□ 0.4
MCF2L-203ENST00000375604 RRM2P31350 389 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 ABL2P42684 1182 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 CASP7P55210 303 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 VAC14Q08AM6 782 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 PALMDQ9NP74 551 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 VTA1Q9NP79 307 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 DRG1Q9Y295 367 aaKnown RBP17.53■□□□□ 0.4
MCF2L-203ENST00000375604 RBAK-RBAKDNI3L0D1 243 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 PSMD12O00232 456 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-203ENST00000375604 CD86P42081 329 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 LRRC8BQ6P9F7 803 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 CATSPERGQ6ZRH7 1159 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 SCUBE1Q8IWY4 988 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 CERS5Q8N5B7 392 aa17.53■□□□□ 0.4
MCF2L-203ENST00000375604 MRPL17Q9NRX2 175 aaKnown RBP17.53■□□□□ 0.4
MCF2L-203ENST00000375604 CCDC85CA6NKD9 419 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 RIPK2O43353 540 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 SLC26A11Q86WA9 606 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 C12orf29Q8N999 325 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 IL31RAQ8NI17 732 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 GLMNQ92990 594 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 SERPINF2P08697 491 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 PIRTP0C851 137 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 MAPK10P53779 464 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 BCL2L1Q07817 233 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 UGCGQ16739 394 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 DDR2Q16832 855 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 BNC2Q6ZN30 1099 aaPredicted RBP17.52■□□□□ 0.4
MCF2L-203ENST00000375604 LRRC8DQ7L1W4 858 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 POU5F2Q8N7G0 328 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 EXOC2Q96KP1 924 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 CDHR5Q9HBB8 845 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 SEMA4BQ9NPR2 832 aaPredicted RBP17.52■□□□□ 0.4
MCF2L-203ENST00000375604 TMPRSS4Q9NRS4 437 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 CHST7Q9NS84 486 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 PHGDHO43175 533 aaKnown RBP17.52■□□□□ 0.4
MCF2L-203ENST00000375604 CD52P31358 61 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 CCNG2Q16589 344 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 WLSQ5T9L3 541 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 KCNT2Q6UVM3 1135 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 EFL1Q7Z2Z2 1120 aaKnown RBP17.52■□□□□ 0.4
MCF2L-203ENST00000375604 FGD2Q7Z6J4 655 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 TRIM69Q86WT6 500 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 GATAD2AQ86YP4 633 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 TRAPPC5Q8IUR0 188 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 FOXP3Q9BZS1 431 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 TM6SF2Q9BZW4 377 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 IKZF4Q9H2S9 585 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 FRMPD1Q5SYB0 1578 aa17.52■□□□□ 0.4
MCF2L-203ENST00000375604 CXCL11O14625 94 aa17.52■□□□□ 0.39
MCF2L-203ENST00000375604 NCKAP1LP55160 1127 aa17.52■□□□□ 0.39
MCF2L-203ENST00000375604 MARSP56192 900 aaKnown RBP17.52■□□□□ 0.39
MCF2L-203ENST00000375604 IKBKEQ14164 716 aa17.52■□□□□ 0.39
MCF2L-203ENST00000375604 ATP13A4Q4VNC1 1196 aa17.52■□□□□ 0.39
MCF2L-203ENST00000375604 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.52■□□□□ 0.39
MCF2L-203ENST00000375604 SOCS4Q8WXH5 440 aa17.52■□□□□ 0.39
MCF2L-203ENST00000375604 ARMCX1Q9P291 453 aa17.52■□□□□ 0.39
MCF2L-203ENST00000375604 NFASCO94856 1347 aa17.52■□□□□ 0.39
MCF2L-203ENST00000375604 TBL1XO60907 577 aa17.52■□□□□ 0.39
MCF2L-203ENST00000375604 PSMB4P28070 264 aa17.52■□□□□ 0.39
MCF2L-203ENST00000375604 CTNNB1P35222 781 aa17.52■□□□□ 0.39
MCF2L-203ENST00000375604 GPR142Q7Z601 462 aa17.52■□□□□ 0.39
MCF2L-203ENST00000375604 ELOA2Q8IYF1 753 aaPredicted RBP17.52■□□□□ 0.39
MCF2L-203ENST00000375604 CENPTQ96BT3 561 aa17.52■□□□□ 0.39
MCF2L-203ENST00000375604 DMGDHQ9UI17 866 aaKnown RBP17.52■□□□□ 0.39
MCF2L-203ENST00000375604 TYMPP19971 482 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 GLRA2P23416 452 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 PKN2Q16513 984 aaKnown RBP17.51■□□□□ 0.39
MCF2L-203ENST00000375604 SETMARQ53H47 684 aaPredicted RBP17.51■□□□□ 0.39
MCF2L-203ENST00000375604 FOXR1Q6PIV2 292 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 KDM7AQ6ZMT4 941 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 KIRREL3Q8IZU9 778 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 TMEM159Q96B96 161 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 NDNQ99608 321 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 BLOC1S4Q9NUP1 217 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 NMRK1Q9NWW6 199 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 GPSM3Q9Y4H4 160 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 DDX3XO00571 662 aaKnown RBP eCLIP17.51■□□□□ 0.39
MCF2L-203ENST00000375604 ACKR2O00590 384 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 WBP4O75554 376 aaKnown RBP17.51■□□□□ 0.39
MCF2L-203ENST00000375604 EIF2S1P05198 315 aaKnown RBP17.51■□□□□ 0.39
MCF2L-203ENST00000375604 PECAM1P16284 738 aaPredicted RBP17.51■□□□□ 0.39
MCF2L-203ENST00000375604 PPP3CAQ08209 521 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 TCP10LQ8TDR4 215 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 TBCDQ9BTW9 1192 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 NOD2Q9HC29 1040 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 SMAPO00193 183 aa17.51■□□□□ 0.39
MCF2L-203ENST00000375604 THRAP10827 490 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms