RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 CAPN14A8MX76 684 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 RECQL4O94761 1208 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 F2P00734 622 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 CD4P01730 458 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 HNRNPDQ14103 355 aaKnown RBP11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 ACAP1Q15027 740 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 AMHR2Q16671 573 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 JADE1Q6IE81 842 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 GLB1LQ6UWU2 654 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 ZNF554Q86TJ5 538 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 KATNAL2Q8IYT4 538 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 PDIK1LQ8N165 341 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 SLAIN1Q8ND83 568 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 DCAKDQ8WVC6 231 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 E2F7Q96AV8 911 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 PGBD4Q96DM1 585 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 SRPK1Q96SB4 655 aaKnown RBP11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 EBF4Q9BQW3 602 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 ZBED2Q9BTP6 218 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 ASB7Q9H672 318 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 MRPL47Q9HD33 250 aaKnown RBP11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 UBQLN1Q9UMX0 589 aaKnown RBP11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 PSME4Q14997 1843 aa11.51□□□□□ -0.57
RPRD1B-201ENST00000373433 LOC100653049A0A140TA62 436 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 CYB561D2O14569 222 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 KRT34O76011 436 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 PROCP04070 461 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 ZNF865P0CJ78 1059 aaPredicted RBP11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 CDK4P11802 303 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 DARSP14868 501 aaKnown RBP11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 MRPS6P82932 125 aaKnown RBP11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 MPP3Q13368 585 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 CNGA3Q16281 694 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 SLC44A4Q53GD3 710 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 RNF111Q6ZNA4 994 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 DENND5BQ6ZUT9 1274 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 NUDCD3Q8IVD9 361 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 DCLK2Q8N568 766 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 HELQQ8TDG4 1101 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 ZNF296Q8WUU4 475 aaPredicted RBP11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 DDX1Q92499 740 aaKnown RBP11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 MINDY3Q9H8M7 445 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 PACSIN3Q9UKS6 424 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 STRIP2Q9ULQ0 834 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 TBC1D30Q9Y2I9 924 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 A0A088AWK7 358 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 M0QYV0 167 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 ZC3H11AO75152 810 aaKnown RBP eCLIP11.5□□□□□ -0.579e-6■■■■□ 23.7
RPRD1B-201ENST00000373433 RPLP2P05387 115 aaKnown RBP11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 FUT4P22083 530 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 STIP1P31948 543 aaKnown RBP11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 SNX17Q15036 470 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 KBTBD12Q3ZCT8 623 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 TSHZ1Q6ZSZ6 1077 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 CHSY1Q86X52 802 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 PPM1NQ8N819 430 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 PRICKLE1Q96MT3 831 aaPredicted RBP11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 TRIM49D1C9J1S8 452 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 H7C0C1 242 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 FAM155BO75949 473 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 ATP5OP48047 213 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 SERPINB8P50452 374 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 CRYBB1P53674 252 aaPredicted RBP11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 MBTD1Q05BQ5 628 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 PEX6Q13608 980 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 TDRD10Q5VZ19 366 aaKnown RBP11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 ATG16L1Q676U5 607 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 AAGABQ6PD74 315 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 CDHR3Q6ZTQ4 885 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 URGCPQ8TCY9 931 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 RSAD2Q8WXG1 361 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 MFSD14AQ96MC6 490 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 MAD1L1Q9Y6D9 718 aa11.5□□□□□ -0.57
RPRD1B-201ENST00000373433 BOLA2-SMG1P6H3BVE0 249 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 TFAP2AP05549 437 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 NFICP08651 508 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 VCPP55072 806 aaKnown RBP11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 PPIDQ08752 370 aaKnown RBP11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 ZACNQ401N2 412 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 ZFP28Q8NHY6 868 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 RAB3IL1Q8TBN0 382 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 CFAP36Q96G28 342 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 HHIPL1Q96JK4 782 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 MYH9P35579 1960 aaKnown RBP11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 GRAP2O75791 330 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 B3GAT3O94766 335 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 PCSK6P29122 969 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 ETV4P43268 484 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 PURAQ00577 322 aaKnown RBP11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 BFSP2Q13515 415 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 GRM2Q14416 872 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 TLR1Q15399 786 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 GEN1Q17RS7 908 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 UGT2A3Q6UWM9 527 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 APPL2Q8NEU8 664 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 LRRC4Q9HBW1 653 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 AVENQ9NQS1 362 aaPredicted RBP11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 CISHQ9NSE2 258 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 FAM49BQ9NUQ9 324 aa11.49□□□□□ -0.57
RPRD1B-201ENST00000373433 SLC38A7Q9NVC3 462 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms