RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 PPP1R12AO14974 1030 aaPredicted RBP19.27■□□□□ 0.68
USP49-202ENST00000373010 CBX6O95503 412 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 LTFP02788 710 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 MLNP12872 115 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 CDK16Q00536 496 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 RAB41Q5JT25 222 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 STEAP4Q687X5 459 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 ARNTL2Q8WYA1 636 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 PGLYRP2Q96PD5 576 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 RTP3Q9BQQ7 232 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 TRIM55Q9BYV6 548 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 ZFP69BQ9UJL9 534 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 FBXW11Q9UKB1 542 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 CDH9Q9ULB4 789 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 KPNA6O60684 536 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 TOP3BO95985 862 aaKnown RBP19.27■□□□□ 0.68
USP49-202ENST00000373010 MYCNP04198 464 aaPredicted RBP19.27■□□□□ 0.68
USP49-202ENST00000373010 IFRD2Q12894 506 aaPredicted RBP19.27■□□□□ 0.68
USP49-202ENST00000373010 PARP6Q2NL67 630 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 BHLHA9Q7RTU4 235 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 PID1Q7Z2X4 250 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 SERINC5Q86VE9 423 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 NDUFAF2Q8N183 169 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 PGBD4Q96DM1 585 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 ARHGAP39Q9C0H5 1083 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 CHST12Q9NRB3 414 aa19.27■□□□□ 0.68
USP49-202ENST00000373010 MGEA5O60502 916 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 POMCP01189 267 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 CYBAP13498 195 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 CD52P31358 61 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 TPI1P60174 286 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 SEMA3BQ13214 749 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 RIPK1Q13546 671 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 UPP1Q16831 310 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 CEP57Q86XR8 500 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 ZNF398Q8TD17 642 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 HASPINQ8TF76 798 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 UTP4Q969X6 686 aaKnown RBP19.26■□□□□ 0.67
USP49-202ENST00000373010 MYLPFQ96A32 169 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 NTAN1Q96AB6 310 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 MTBPQ96DY7 904 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 SLC9A7Q96T83 725 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 FERMT1Q9BQL6 677 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 KCNK13Q9HB14 408 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 ZFYVE28Q9HCC9 887 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 NMRK2Q9NPI5 230 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 EIF2B3Q9NR50 452 aaKnown RBP19.26■□□□□ 0.67
USP49-202ENST00000373010 SYBUQ9NX95 663 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 GIT1Q9Y2X7 761 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 NUP205Q92621 2012 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 CCDC195A0A1B0GUA6 201 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 C9IYK1 514 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 BRCC3P46736 316 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 MGAT3Q09327 533 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 NPWQ8N729 165 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 TRIB2Q92519 343 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 TBC1D31Q96DN5 1066 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 IL1RAPL1Q9NZN1 696 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 PTCH2Q9Y6C5 1203 aa19.26■□□□□ 0.67
USP49-202ENST00000373010 C2orf71A6NGG8 1288 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 ALDH1A2O94788 518 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 SERPINB9P50453 376 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 SCAPQ12770 1279 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 TRIM32Q13049 653 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 E2F5Q15329 346 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 CES4AQ5XG92 561 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 CES3Q6UWW8 571 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 SMARCD1Q96GM5 515 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 AGAP3Q96P47 875 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 KLHL8Q9P2G9 620 aaPredicted RBP19.25■□□□□ 0.67
USP49-202ENST00000373010 SHROOM3Q8TF72 1996 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 ATP5HO75947 161 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 PTPN3P26045 913 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 THPOP40225 353 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 ARFIP2P53365 341 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 NIPAL4Q0D2K0 466 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 CRYMQ14894 314 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 RGMBQ6NW40 437 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 GORASP1Q9BQQ3 440 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 COLEC11Q9BWP8 271 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 TMEM120AQ9BXJ8 343 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 LRMDAQ9H2I8 198 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 HEY2Q9UBP5 337 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 PADI3Q9ULW8 664 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 GABRQQ9UN88 632 aa19.25■□□□□ 0.67
USP49-202ENST00000373010 USP12O75317 370 aa19.24■□□□□ 0.67
USP49-202ENST00000373010 PGAM1P18669 254 aa19.24■□□□□ 0.67
USP49-202ENST00000373010 BDNFP23560 247 aa19.24■□□□□ 0.67
USP49-202ENST00000373010 SWT1Q5T5J6 900 aaKnown RBP19.24■□□□□ 0.67
USP49-202ENST00000373010 CLNKQ7Z7G1 428 aa19.24■□□□□ 0.67
USP49-202ENST00000373010 MAGEC3Q8TD91 643 aa19.24■□□□□ 0.67
USP49-202ENST00000373010 APBB2Q92870 758 aa19.24■□□□□ 0.67
USP49-202ENST00000373010 SLC7A6OSQ96CW6 309 aaPredicted RBP19.24■□□□□ 0.67
USP49-202ENST00000373010 ZNF395Q9H8N7 513 aaPredicted RBP19.24■□□□□ 0.67
USP49-202ENST00000373010 TMLHEQ9NVH6 421 aa19.24■□□□□ 0.67
USP49-202ENST00000373010 MKS1Q9NXB0 559 aa19.24■□□□□ 0.67
USP49-202ENST00000373010 IGSF9Q9P2J2 1179 aa19.24■□□□□ 0.67
USP49-202ENST00000373010 PSAT1Q9Y617 370 aa19.24■□□□□ 0.67
USP49-202ENST00000373010 GPR182O15218 404 aa19.24■□□□□ 0.67
USP49-202ENST00000373010 B3GAT3O94766 335 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms