RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 KRT8P05787 483 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 ITGAVP06756 1048 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 FASTKQ14296 549 aaKnown RBP14.03□□□□□ -0.16
VCP-201ENST00000358901 NR6A1Q15406 480 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 UGCGQ16739 394 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 TJAP1Q5JTD0 557 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 ELMSAN1Q6PJG2 1045 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 PTF1AQ7RTS3 328 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 MIER2Q8N344 545 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 NR1H4Q96RI1 486 aaPredicted RBP14.03□□□□□ -0.16
VCP-201ENST00000358901 ALOX15BO15296 676 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 DDX3YO15523 660 aaKnown RBP14.03□□□□□ -0.16
VCP-201ENST00000358901 NFICP08651 508 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 SCNN1BP51168 640 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 ZNF143P52747 638 aaPredicted RBP14.03□□□□□ -0.16
VCP-201ENST00000358901 NCALDP61601 193 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 APTXQ7Z2E3 356 aaKnown RBP14.03□□□□□ -0.16
VCP-201ENST00000358901 TNIP2Q8NFZ5 429 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 SNRNP25Q9BV90 132 aaKnown RBP14.03□□□□□ -0.16
VCP-201ENST00000358901 TMEM134Q9H6X4 195 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 IMPAD1Q9NX62 359 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 ASTN2O75129 1339 aaPredicted RBP14.03□□□□□ -0.16
VCP-201ENST00000358901 FASP25445 335 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 NPY2RP49146 381 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 FKBP1CQ5VVH2 108 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 NKX2-3Q8TAU0 364 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 NMRK2Q9NPI5 230 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 TRHDEQ9UKU6 1024 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 SH3BP1Q9Y3L3 701 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 NR2E1Q9Y466 385 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 ROBO3Q96MS0 1386 aa14.03□□□□□ -0.16
VCP-201ENST00000358901 CNTNAP2Q9UHC6 1331 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 GPR182O15218 404 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 EDF1O60869 148 aaKnown RBP14.02□□□□□ -0.16
VCP-201ENST00000358901 ZMPSTE24O75844 475 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 ASS1P00966 412 aaKnown RBP14.02□□□□□ -0.16
VCP-201ENST00000358901 PSMB4P28070 264 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 DDX53Q86TM3 631 aaKnown RBP14.02□□□□□ -0.16
VCP-201ENST00000358901 SLC22A9Q8IVM8 553 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 OR52K1Q8NGK4 314 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 COPS7BQ9H9Q2 264 aaPredicted RBP14.02□□□□□ -0.16
VCP-201ENST00000358901 XPNPEP3Q9NQH7 507 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 PDGFCQ9NRA1 345 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 VTI1BQ9UEU0 232 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 PCDHB8Q9UN66 801 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 A0A0A0MRY4 1105 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 ALDH1A3P47895 512 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 DEPDC1Q5TB30 811 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 LRRC8DQ7L1W4 858 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 LPCAT2Q7L5N7 544 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 PLEKHH3Q7Z736 793 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 LRRC57Q8N9N7 239 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 GLT1D1Q96MS3 346 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 SPATA13Q96N96 652 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 MRIQ9BWK5 157 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 CLPBQ9H078 707 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 SPON1Q9HCB6 807 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 HPS4Q9NQG7 708 aa14.02□□□□□ -0.16
VCP-201ENST00000358901 TOMM70O94826 608 aa14.02□□□□□ -0.17
VCP-201ENST00000358901 POMCP01189 267 aa14.02□□□□□ -0.17
VCP-201ENST00000358901 SERPINB1P30740 379 aa14.02□□□□□ -0.17
VCP-201ENST00000358901 TUBP50607 506 aa14.02□□□□□ -0.17
VCP-201ENST00000358901 RENBPP51606 427 aa14.02□□□□□ -0.17
VCP-201ENST00000358901 CAPSQ13938 189 aa14.02□□□□□ -0.17
VCP-201ENST00000358901 AARS2Q5JTZ9 985 aaKnown RBP14.02□□□□□ -0.17
VCP-201ENST00000358901 UNC5AQ6ZN44 842 aa14.02□□□□□ -0.17
VCP-201ENST00000358901 PPP1R10Q96QC0 940 aaKnown RBP14.02□□□□□ -0.17
VCP-201ENST00000358901 SEPT3Q9UH03 358 aa14.02□□□□□ -0.17
VCP-201ENST00000358901 COG5Q9UP83 839 aa14.02□□□□□ -0.17
VCP-201ENST00000358901 HACD1B0YJ81 288 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 SNHG28P0DPA3 235 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 ST8SIA6P61647 398 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 DHFR2Q86XF0 187 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 PCDH20Q8N6Y1 951 aaKnown RBP14.01□□□□□ -0.17
VCP-201ENST00000358901 RIN3Q8TB24 985 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 SIKE1Q9BRV8 207 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 DCUN1D5Q9BTE7 237 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 ULBP1Q9BZM6 244 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 TBC1D13Q9NVG8 400 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 TCRBV9S1A1TA0A576 114 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 AVILO75366 819 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 RECQL4O94761 1208 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 CRTAMO95727 393 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 SERPINF2P08697 491 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 SOAT1P35610 550 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 OXCT1P55809 520 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 PARP6Q2NL67 630 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 OVOS1Q6IE37 1185 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 KIAA0319LQ8IZA0 1049 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 ZNF398Q8TD17 642 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 MIEF2Q96C03 454 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 RNPEPQ9H4A4 650 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 LRRC4CQ9HCJ2 640 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 NUDT5Q9UKK9 219 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 CLOCKO15516 846 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 PRIM2P49643 509 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 TGFB2P61812 414 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 TRAF2Q12933 501 aa14.01□□□□□ -0.17
VCP-201ENST00000358901 NFE2Q16621 373 aaPredicted RBP14.01□□□□□ -0.17
VCP-201ENST00000358901 CYP51A1Q16850 503 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms