RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 CARTPTQ16568 116 aa14.42□□□□□ -0.1
SREBF1-202ENST00000355815 C1orf127Q8N9H9 656 aa14.42□□□□□ -0.1
SREBF1-202ENST00000355815 TLCD1Q96CP7 247 aa14.42□□□□□ -0.1
SREBF1-202ENST00000355815 CYP4F12Q9HCS2 524 aa14.42□□□□□ -0.1
SREBF1-202ENST00000355815 CNGB3Q9NQW8 809 aa14.42□□□□□ -0.1
SREBF1-202ENST00000355815 PLA2G4CQ9UP65 541 aa14.42□□□□□ -0.1
SREBF1-202ENST00000355815 SIGLEC16A6NMB1 481 aa14.42□□□□□ -0.1
SREBF1-202ENST00000355815 F7P08709 466 aaPredicted RBP14.42□□□□□ -0.1
SREBF1-202ENST00000355815 AVPR1AP37288 418 aa14.42□□□□□ -0.1
SREBF1-202ENST00000355815 RGS2P41220 211 aa14.42□□□□□ -0.1
SREBF1-202ENST00000355815 ARHGDIAP52565 204 aa14.42□□□□□ -0.1
SREBF1-202ENST00000355815 TRIM25Q14258 630 aaKnown RBP14.42□□□□□ -0.1
SREBF1-202ENST00000355815 ALYREFQ86V81 257 aaKnown RBP14.42□□□□□ -0.1
SREBF1-202ENST00000355815 GIPC3Q8TF64 312 aa14.42□□□□□ -0.1
SREBF1-202ENST00000355815 TWNKQ96RR1 684 aa14.42□□□□□ -0.1
SREBF1-202ENST00000355815 SHOC2Q9UQ13 582 aa14.42□□□□□ -0.1
SREBF1-202ENST00000355815 WASF2Q9Y6W5 498 aa14.42□□□□□ -0.1
SREBF1-202ENST00000355815 USP54Q70EL1 1684 aa14.42□□□□□ -0.1
SREBF1-202ENST00000355815 LSM1O15116 133 aaKnown RBP14.41□□□□□ -0.1
SREBF1-202ENST00000355815 ALBP02768 609 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 ANPEPP15144 967 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 HADHAP40939 763 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 OAZ1P54368 228 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 ARL13BQ3SXY8 428 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 FNBP1LQ5T0N5 605 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 PPP1R26Q5T8A7 1209 aaPredicted RBP14.41□□□□□ -0.1
SREBF1-202ENST00000355815 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.41□□□□□ -0.15e-10■■■■■ 95.5
SREBF1-202ENST00000355815 OR6Y1Q8NGX8 325 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 TNIP3Q96KP6 325 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 FAM193BQ96PV7 902 aaPredicted RBP14.41□□□□□ -0.1
SREBF1-202ENST00000355815 SRPK1Q96SB4 655 aaKnown RBP14.41□□□□□ -0.1
SREBF1-202ENST00000355815 RRN3Q9NYV6 651 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 CACNG4Q9UBN1 327 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 SATB2Q9UPW6 733 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 EEF2KO00418 725 aaKnown RBP14.41□□□□□ -0.1
SREBF1-202ENST00000355815 BNIP3LO60238 219 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 NFKBIAP25963 317 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 CDK16Q00536 496 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 ADIGQ0VDE8 80 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 GRIK4Q16099 956 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 GNASQ5JWF2 1037 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 LGMNQ99538 433 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 FOXP3Q9BZS1 431 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 LRMDAQ9H2I8 198 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 ST6GALNAC4Q9H4F1 302 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 MRPL40Q9NQ50 206 aaKnown RBP14.41□□□□□ -0.1
SREBF1-202ENST00000355815 TIAM2Q8IVF5 1701 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 CLDN5O00501 218 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 RGS5O15539 181 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 PMPCBO75439 489 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 B3GAT3O94766 335 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 PTK2BQ14289 1009 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 SLC45A4Q5BKX6 768 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 PDPK2PQ6A1A2 396 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 ITPRIPL1Q6GPH6 555 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 LBX2Q6XYB7 198 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 OTOAQ7RTW8 1153 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 IPMKQ8NFU5 416 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 LENG1Q96BZ8 264 aaPredicted RBP14.41□□□□□ -0.1
SREBF1-202ENST00000355815 ELOVL4Q9GZR5 314 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 RUBCNLQ9H714 662 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 ATXN10Q9UBB4 475 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 IPO11Q9UI26 975 aaKnown RBP14.41□□□□□ -0.1
SREBF1-202ENST00000355815 CDY2AQ9Y6F7 541 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 CDY1Q9Y6F8 540 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 WDR27A2RRH5 827 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 CASTOR2A6NHX0 329 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 USP2O75604 605 aaPredicted RBP14.41□□□□□ -0.1
SREBF1-202ENST00000355815 SERPINB10P48595 397 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 BNIP1Q12981 228 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 PDCD6IPQ8WUM4 868 aaKnown RBP14.41□□□□□ -0.1
SREBF1-202ENST00000355815 TEPSINQ96N21 525 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 FSD1LQ9BXM9 530 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 MAN1C1Q9NR34 630 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 AP4S1Q9Y587 144 aa14.41□□□□□ -0.1
SREBF1-202ENST00000355815 SMCHD1A6NHR9 2005 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 TCRBV7S3A2A0A539 114 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 SYNDIG1LA6NDD5 238 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 HCRTO43612 131 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 IL1R2P27930 398 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 ARL2P36404 184 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 ETFBP38117 255 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 MPP2Q14168 576 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 DGKDQ16760 1214 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 TRABD2AQ86V40 505 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 METTL23Q86XA0 190 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 RIOX2Q8IUF8 465 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 DEFB106AQ8N104 65 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 DDX1Q92499 740 aaKnown RBP14.4□□□□□ -0.1
SREBF1-202ENST00000355815 GLMNQ92990 594 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 RMND5BQ96G75 393 aaPredicted RBP14.4□□□□□ -0.1
SREBF1-202ENST00000355815 ZNF570Q96NI8 536 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 BBS2Q9BXC9 721 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.4□□□□□ -0.15e-8■■■□□ 18.9
SREBF1-202ENST00000355815 UBA6A0AVT1 1052 aaPredicted RBP14.4□□□□□ -0.1
SREBF1-202ENST00000355815 MYO1GB0I1T2 1018 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 RECQL4O94761 1208 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 TNFAIP8O95379 198 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 CETPP11597 493 aa14.4□□□□□ -0.1
SREBF1-202ENST00000355815 FOXN2P32314 431 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms