RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 FGRP09769 529 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 ALOX5P09917 674 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 TCN1P20061 433 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-203ENST00000349748 MATN1P21941 496 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 RAD23AP54725 363 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 NAPAP54920 295 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 ATP6V0D1P61421 351 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 ECT2LQ008S8 904 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 SPCS2Q15005 226 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 SLC9A4Q6AI14 798 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 UGT3A1Q6NUS8 523 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 NEK5Q6P3R8 708 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 TTC33Q6PID6 262 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-203ENST00000349748 SLC51BQ86UW2 128 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 CATSPER3Q86XQ3 398 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 NUDCD3Q8IVD9 361 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 TGFBRAP1Q8WUH2 860 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 ZNF778Q96MU6 729 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 CIB1Q99828 191 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 WDR83Q9BRX9 315 aaKnown RBP10.92□□□□□ -0.66
CAPN3-203ENST00000349748 BARHL2Q9NY43 387 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 NXF1Q9UBU9 619 aaKnown RBP10.92□□□□□ -0.66
CAPN3-203ENST00000349748 ZNF229Q9UJW7 825 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 APOBEC2Q9Y235 224 aaKnown RBP10.92□□□□□ -0.66
CAPN3-203ENST00000349748 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.92□□□□□ -0.66
CAPN3-203ENST00000349748 BOLA1Q9Y3E2 137 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 GOLGA8QA0A0J9YX86 632 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 PRSS51A0A1B0GVH4 220 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 GOLGA8OA6NCC3 632 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 ZNF839A8K0R7 811 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 GOLGA8NF8WBI6 632 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 CFLARO15519 480 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 DCXO43602 365 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 TSPAN1O60635 241 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 KLHL2O95198 593 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 COL6A1P12109 1028 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 NAGAP17050 411 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 PRKACAP17612 351 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 NFE2Q16621 373 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-203ENST00000349748 CCDC142Q17RM4 750 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 TRAF7Q6Q0C0 670 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 SLC22A16Q86VW1 577 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 BRSK2Q8IWQ3 736 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 SLC4A11Q8NBS3 891 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 FAM156AQ8NDB6 213 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 PDCD6IPQ8WUM4 868 aaKnown RBP10.92□□□□□ -0.66
CAPN3-203ENST00000349748 ATL1Q8WXF7 558 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 HTRA1Q92743 480 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 SH3YL1Q96HL8 342 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-203ENST00000349748 CDRT15Q96T59 188 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 TMEM121Q9BTD3 319 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 DHRS4Q9BTZ2 278 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 EMILIN2Q9BXX0 1053 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 ANO3Q9BYT9 981 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 SEPT3Q9UH03 358 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 IKBKGQ9Y6K9 419 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 A0A1B0GUL6 1792 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 ZNF804BA4D1E1 1349 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 SNTNA6NMZ2 147 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 CLDN25C9JDP6 229 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 MEN1O00255 615 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 ENPP3O14638 875 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 TOP3BO95985 862 aaKnown RBP10.92□□□□□ -0.66
CAPN3-203ENST00000349748 CAPN1P07384 714 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 BASP1P80723 227 aaKnown RBP10.92□□□□□ -0.66
CAPN3-203ENST00000349748 GALK2Q01415 458 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 KNOP1Q1ED39 458 aaKnown RBP10.92□□□□□ -0.66
CAPN3-203ENST00000349748 FNBP1LQ5T0N5 605 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 SH2D5Q6ZV89 423 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 TTC30BQ8N4P2 665 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 DAGLBQ8NCG7 672 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 PSD4Q8NDX1 1056 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 ABHD11Q8NFV4 315 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 ATP6V1E2Q96A05 226 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 CMTM5Q96DZ9 223 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 NACC1Q96RE7 527 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 CITED4Q96RK1 184 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 ZNF347Q96SE7 839 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 INTS2Q9H0H0 1204 aaKnown RBP10.92□□□□□ -0.66
CAPN3-203ENST00000349748 ACSS3Q9H6R3 686 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 EPS8L2Q9H6S3 715 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 RUBCNLQ9H714 662 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 MAGEE1Q9HCI5 957 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 ZNF304Q9HCX3 659 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 KLHL11Q9NVR0 708 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 DNAJC28Q9NX36 388 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 MCM9Q9NXL9 1143 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.92□□□□□ -0.66
CAPN3-203ENST00000349748 SERPINB13Q9UIV8 391 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 PCDHA12Q9UN75 941 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 KIAA1024Q9UPX6 916 aa10.92□□□□□ -0.66
CAPN3-203ENST00000349748 TAF1LQ8IZX4 1826 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 LINC00854A0A1B0GVQ3 168 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 SMCO2A6NFE2 343 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 STX16-NPEPL1H3BU86 382 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 NOL3O60936 208 aaKnown RBP10.91□□□□□ -0.66
CAPN3-203ENST00000349748 B3GALNT1O75752 331 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 FKBP9O95302 570 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 CLIC3O95833 236 aa10.91□□□□□ -0.66
CAPN3-203ENST00000349748 IFNB1P01574 187 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms