RNA–Protein interactions for RNA: ENST00000336596.6

EPHA3-201, Transcript of EPH receptor A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA3, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-201ENST00000336596 DNAAF2Q9NVR5 837 aaKnown RBP7.53□□□□□ -1.2
EPHA3-201ENST00000336596 ERI2A8K979 691 aaKnown RBP7.52□□□□□ -1.21
EPHA3-201ENST00000336596 TCF3P15923 654 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 DGKAP23743 735 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 VARSP26640 1264 aaKnown RBP7.52□□□□□ -1.21
EPHA3-201ENST00000336596 NTSP30990 170 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 ABL2P42684 1182 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 BRMS1LQ5PSV4 323 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 SCARA3Q6AZY7 606 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 KRT80Q6KB66 452 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 NEK5Q6P3R8 708 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 CYP20A1Q6UW02 462 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 CTNNAL1Q9UBT7 734 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 ENTPD4Q9Y227 616 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 ANKRD6Q9Y2G4 727 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 COLEC10Q9Y6Z7 277 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 TMEM114B3SHH9 223 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 SLCO1B7G3V0H7 640 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 ZBTB39O15060 712 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 ZNF500O60304 480 aaPredicted RBP7.52□□□□□ -1.21
EPHA3-201ENST00000336596 ELNP15502 786 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 CYP11B1P15538 503 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 SARSP49591 514 aaKnown RBP7.52□□□□□ -1.21
EPHA3-201ENST00000336596 SESN2P58004 480 aaPredicted RBP7.52□□□□□ -1.21
EPHA3-201ENST00000336596 ZNF200P98182 395 aaPredicted RBP7.52□□□□□ -1.21
EPHA3-201ENST00000336596 LPCAT1Q8NF37 534 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 HCAR2Q8TDS4 363 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 CPA5Q8WXQ8 436 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 ARNTL2Q8WYA1 636 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 ACTR5Q9H9F9 607 aaPredicted RBP7.52□□□□□ -1.21
EPHA3-201ENST00000336596 RAB6BQ9NRW1 208 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 PSMC3IPQ9P2W1 217 aaPredicted RBP7.52□□□□□ -1.21
EPHA3-201ENST00000336596 GRID1Q9ULK0 1009 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 CDY1Q9Y6F8 540 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 MGAT4DA6NG13 374 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 GOLGA8RI6L899 631 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 PEX10O60683 326 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 ATP9AO75110 1047 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 RECQL4O94761 1208 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 GLI1P08151 1106 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 KCNA3P22001 575 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 GPR1P46091 355 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 CASP6P55212 293 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 MRPS22P82650 360 aaKnown RBP7.52□□□□□ -1.21
EPHA3-201ENST00000336596 PLOD1Q02809 727 aaPredicted RBP7.52□□□□□ -1.21
EPHA3-201ENST00000336596 LRRC8BQ6P9F7 803 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 LVRNQ6Q4G3 990 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 PHYKPLQ8IUZ5 450 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 MAP4K3Q8IVH8 894 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 C3orf20Q8ND61 904 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 ZDHHC6Q9H6R6 413 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 PCMTD2Q9NV79 361 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 TMEM161AQ9NX61 479 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.52□□□□□ -1.21
EPHA3-201ENST00000336596 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.52□□□□□ -1.21
EPHA3-201ENST00000336596 RBM47A0AV96 593 aaKnown RBP7.52□□□□□ -1.21
EPHA3-201ENST00000336596 ACSL4O60488 711 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 LTFP02788 710 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 CD44P16070 742 aaKnown RBP7.52□□□□□ -1.21
EPHA3-201ENST00000336596 PTPN1P18031 435 aaKnown RBP7.52□□□□□ -1.21
EPHA3-201ENST00000336596 FGFR4P22455 802 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 PBLDP30039 288 aaPredicted RBP7.52□□□□□ -1.21
EPHA3-201ENST00000336596 RRM2P31350 389 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 NOS2P35228 1153 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 SCNN1GP51170 649 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 GCNT1Q02742 428 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 ELOAQ14241 798 aaKnown RBP7.52□□□□□ -1.21
EPHA3-201ENST00000336596 BHLHB9Q6PI77 547 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 CYP4Z2PQ8N1L4 340 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 ZNF555Q8NEP9 628 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 FAM172AQ8WUF8 416 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 TASP1Q9H6P5 420 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.52□□□□□ -1.21
EPHA3-201ENST00000336596 DCDC2Q9UHG0 476 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 IRS2Q9Y4H2 1338 aa7.52□□□□□ -1.21
EPHA3-201ENST00000336596 LRRC14BA6NHZ5 514 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 SGTAO43765 313 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 CXCL8P10145 99 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 ICAM3P32942 547 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 HPCAL1P37235 193 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 MLH1P40692 756 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 CASP4P49662 377 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 ITGA8P53708 1063 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 BNC1Q01954 994 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 NAA30Q147X3 362 aaPredicted RBP7.51□□□□□ -1.21
EPHA3-201ENST00000336596 CLEC16AQ2KHT3 1053 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 PAGE2Q7Z2X7 111 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 RD3Q7Z3Z2 195 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 CHPFQ8IZ52 775 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 METTL21AQ8WXB1 218 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 BRI3BPQ8WY22 251 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 SPATA17Q96L03 361 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 INPP4AQ96PE3 977 aaPredicted RBP7.51□□□□□ -1.21
EPHA3-201ENST00000336596 KCNS3Q9BQ31 491 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 ARHGAP9Q9BRR9 750 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 BBS2Q9BXC9 721 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 NIFKQ9BYG3 293 aaKnown RBP7.51□□□□□ -1.21
EPHA3-201ENST00000336596 BLOC1S4Q9NUP1 217 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 FAM105AQ9NUU6 356 aa7.51□□□□□ -1.21
EPHA3-201ENST00000336596 PCDHA11Q9Y5I1 949 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms