RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 PRODHO43272 600 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 PSIP1O75475 530 aaKnown RBP10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 HSD17B12Q53GQ0 312 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 MROH9Q5TGP6 573 aa10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 RUVBL2Q9Y230 463 aaKnown RBP10.56□□□□□ -0.72
SPTBN1-201ENST00000333896 FAM220BPB1ANY3 271 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 NUDT17P0C025 328 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 TMEM26Q6ZUK4 368 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 FBXW8Q8N3Y1 598 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 MUC3BQ9H195 1237 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 RAD54BQ9Y620 910 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 NR5A2O00482 541 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 DYNC1LI2O43237 492 aaPredicted RBP10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 RHOBTB3O94955 611 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 ALDH1B1P30837 517 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 FRG1Q14331 258 aaKnown RBP10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 INO80DQ53TQ3 878 aaPredicted RBP10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 ZNF75CPQ92670 426 aaPredicted RBP10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 GPN1Q9HCN4 374 aaPredicted RBP10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 POLD4Q9HCU8 107 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 AP3M2P53677 418 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 PDK4Q16654 411 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 TMEM53Q6P2H8 277 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 HPS6Q86YV9 775 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 KCND2Q9NZV8 630 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 ANKRD6Q9Y2G4 727 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 ARHGEF7Q14155 803 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 HIST2H2ACQ16777 129 aaPredicted RBP10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 TTMPQ5BVD1 217 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 HIST2H2AA3Q6FI13 130 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 FRMD7Q6ZUT3 714 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 SLCO6A1Q86UG4 719 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 TTC29Q8NA56 475 aaPredicted RBP10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 OR8H1Q8NGG4 311 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 DCPSQ96C86 337 aaKnown RBP10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 ZNF333Q96JL9 665 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 FAM49AQ9H0Q0 323 aaPredicted RBP10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 RNF112Q9ULX5 631 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 MAP3K4Q9Y6R4 1608 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 OR14I1A6ND48 311 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 EML1O00423 815 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 ORC5O43913 435 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 PRMT3O60678 531 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 STIP1P31948 543 aaKnown RBP10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 FDFT1P37268 417 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 NPTX2P47972 431 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 AP1S1P61966 158 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 RPL19P84098 196 aaKnown RBP10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 TAF13Q15543 124 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 C4orf46Q504U0 113 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 G2E3Q7L622 706 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 NSMCE3Q96MG7 304 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 MKNK1Q9BUB5 465 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 RSAD1Q9HA92 442 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 PTPRKQ15262 1439 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 KIAA0556O60303 1618 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 ZNF423Q2M1K9 1284 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 TRPV3Q8NET8 790 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 MCFD2Q8NI22 146 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 SPOCK3Q9BQ16 436 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 FICDQ9BVA6 458 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 IRF2BPLQ9H1B7 796 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 PNPLA8Q9NP80 782 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 ZNF638Q14966 1978 aaKnown RBP10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 PDXKO00764 312 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 CDC25CP30307 473 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 TRIM23P36406 574 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 SULT1E1P49888 294 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 CTSWP56202 376 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 TNK2Q07912 1038 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 SHC4Q6S5L8 630 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 TMC4Q7Z404 712 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 HELQQ8TDG4 1101 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 KCNB2Q92953 911 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 ART5Q96L15 291 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 YME1L1Q96TA2 773 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 TCEAL7Q9BRU2 100 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 DGCR6LQ9BY27 220 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 SPAG4Q9NPE6 437 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 POLR1DQ9Y2S0 133 aa10.55□□□□□ -0.72
SPTBN1-201ENST00000333896 OVOS2A0A0G2JMS6 1433 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 SH3D21A4FU49 640 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 NEURL1BA8MQ27 555 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 CYP11B2P19099 503 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 SLC16A2P36021 539 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 PRKAA1Q13131 559 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 TFDP3Q5H9I0 405 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 DENND6BQ8NEG7 585 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 MED11Q9P086 117 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 AP4B1Q9Y6B7 739 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 NLRP1Q9C000 1473 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 RNMTO43148 476 aaKnown RBP10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 TSPAN1O60635 241 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 OR7A10O76100 309 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 ZNF432O94892 652 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 FAUP35544 74 aaKnown RBP10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 YAP1P46937 504 aaKnown RBP10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 DRG2P55039 364 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms