RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 KCNK9Q9NPC2 374 aa7.21□□□□□ -1.25
LYSMD3-201ENST00000315948 GKN1Q9NS71 199 aa7.21□□□□□ -1.25
LYSMD3-201ENST00000315948 GGT7Q9UJ14 662 aa7.21□□□□□ -1.25
LYSMD3-201ENST00000315948 GRID1Q9ULK0 1009 aa7.21□□□□□ -1.25
LYSMD3-201ENST00000315948 PTPRDP23468 1912 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 VPS13AQ96RL7 3174 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 INPPL1O15357 1258 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 DGKIO75912 1065 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 MT-CYBP00156 380 aaPredicted RBP7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 SYN1P17600 705 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 CD68P34810 354 aaPredicted RBP7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 PPP2R2AP63151 447 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 BMPR2Q13873 1038 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 KBTBD12Q3ZCT8 623 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 HEATR6Q6AI08 1181 aaKnown RBP7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 KDM7AQ6ZMT4 941 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 SYDE1Q6ZW31 735 aaPredicted RBP7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 C16orf59Q7L2K0 433 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 COLGALT1Q8NBJ5 622 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 BCAS4Q8TDM0 211 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 TFB1MQ8WVM0 346 aaKnown RBP7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 ZNF778Q96MU6 729 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 RUNDC3BQ96NL0 473 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 FAM124BQ9H5Z6 455 aaPredicted RBP7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 HS3ST4Q9Y661 456 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 TCRBV9S1A1TA0A576 114 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 HMGB1P1B2RPK0 211 aaPredicted RBP7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 E7EVH7 732 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 ZBTB24O43167 697 aaPredicted RBP7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 IRAK2O43187 625 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 TGM2P21980 687 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 MDH1P40925 334 aaKnown RBP7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 ALDH7A1P49419 539 aaKnown RBP7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 IHHQ14623 411 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 ZSCAN26Q16670 478 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 ANKRD33Q7Z3H0 272 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 TTC13Q8NBP0 860 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 FBXO22Q8NEZ5 403 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 KLHL5Q96PQ7 755 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 XPO6Q96QU8 1125 aaKnown RBP7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 SLC22A12Q96S37 553 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 TSPAN18Q96SJ8 248 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 CLSTN3Q9BQT9 956 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 FTHL17Q9BXU8 183 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 SMPD4Q9NXE4 827 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 RABGEF1Q9UJ41 708 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 SQORQ9Y6N5 450 aa7.21□□□□□ -1.26
LYSMD3-201ENST00000315948 LAMA1P25391 3075 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 TMEM120BA0PK00 339 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 ALOX15BO15296 676 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 JCHAINP01591 159 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 SKIP12755 728 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 GJA1P17302 382 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 TYMPP19971 482 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 FGFR3P22607 806 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 MAXP61244 160 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 MRPL58Q14197 206 aaKnown RBP7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 TRMT10CQ7L0Y3 403 aaKnown RBP7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 TAX1BP1Q86VP1 789 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 CNTD1Q8N815 330 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 OR52K2Q8NGK3 314 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 IGSF8Q969P0 613 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 ATXN7L3BQ96GX2 97 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 QKIQ96PU8 341 aaKnown RBP eCLIP7.2□□□□□ -1.261e-7■■■■■ 42.8
LYSMD3-201ENST00000315948 TTPALQ9BTX7 342 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 RSPH14Q9UHP6 348 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 SHOC2Q9UQ13 582 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 COL4A6Q14031 1691 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 A0A0U1RQS6 177 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 LCHNA4D1U4 455 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 C2orf78A6NCI8 922 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 EIF3HO15372 352 aaKnown RBP eCLIP7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 FBXO21O94952 628 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 SGSHP51688 502 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 LMNB2Q03252 620 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 ZKSCAN8Q15776 578 aaPredicted RBP7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 C10orf120Q5SQS8 335 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 ARHGEF18Q6ZSZ5 1173 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 CENPUQ71F23 418 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 PID1Q7Z2X4 250 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 NUP93Q8N1F7 819 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 FBXO32Q969P5 355 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 AZIN2Q96A70 460 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 UROC1Q96N76 676 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 PAIP2Q9BPZ3 127 aaKnown RBP7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 SAGE1Q9NXZ1 904 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 DSEQ9UL01 958 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 TNRC18O15417 2968 aaPredicted RBP7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 SF3B1O75533 1304 aaKnown RBP eCLIP7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 DMDP11532 3685 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 BCLAF3A2AJT9 711 aaKnown RBP7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 SHOX2O60902 331 aaPredicted RBP7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 IGLV3-25P01717 112 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 HAPLN1P10915 354 aaPredicted RBP7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 COL6A1P12109 1028 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 EN2P19622 333 aaPredicted RBP7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 PTPN3P26045 913 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 TUBP50607 506 aa7.2□□□□□ -1.26
LYSMD3-201ENST00000315948 SNX16P57768 344 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms