RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 FAM126BQ8IXS8 530 aa23.84■■□□□ 1.41
RAB40B-201ENST00000269347 SLC44A1Q8WWI5 657 aa23.84■■□□□ 1.41
RAB40B-201ENST00000269347 IRGQQ8WZA9 623 aa23.84■■□□□ 1.41
RAB40B-201ENST00000269347 CELF6Q96J87 481 aaKnown RBP23.84■■□□□ 1.41
RAB40B-201ENST00000269347 ZCWPW1Q9H0M4 648 aa23.84■■□□□ 1.41
RAB40B-201ENST00000269347 UNC93B1Q9H1C4 597 aa23.84■■□□□ 1.41
RAB40B-201ENST00000269347 FETUBQ9UGM5 382 aa23.84■■□□□ 1.41
RAB40B-201ENST00000269347 PRPF4O43172 522 aaKnown RBP eCLIP23.83■■□□□ 1.41
RAB40B-201ENST00000269347 TAC1P20366 129 aa23.83■■□□□ 1.41
RAB40B-201ENST00000269347 MSH2P43246 934 aa23.83■■□□□ 1.41
RAB40B-201ENST00000269347 RSPO2Q6UXX9 243 aaPredicted RBP23.83■■□□□ 1.41
RAB40B-201ENST00000269347 ARHGAP36Q6ZRI8 547 aa23.83■■□□□ 1.41
RAB40B-201ENST00000269347 SH2D5Q6ZV89 423 aa23.83■■□□□ 1.41
RAB40B-201ENST00000269347 NT5C1B-RDH14C9J2C7 533 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 OAZ2O95190 189 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 CSH1P0DML2 217 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 CSH2P0DML3 217 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 PTPN3P26045 913 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 ZBTB17Q13105 803 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 KLHL38Q2WGJ6 581 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 PPM1EQ8WY54 764 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 ZNF419Q96HQ0 510 aaPredicted RBP23.82■■□□□ 1.4
RAB40B-201ENST00000269347 CYTH2Q99418 400 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 PAIP2Q9BPZ3 127 aaKnown RBP23.82■■□□□ 1.4
RAB40B-201ENST00000269347 CRISPLD1Q9H336 500 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 SF3B1O75533 1304 aaKnown RBP eCLIP23.82■■□□□ 1.4
RAB40B-201ENST00000269347 ATXN2Q99700 1313 aaKnown RBP23.82■■□□□ 1.4
RAB40B-201ENST00000269347 SELPP16109 830 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 STX2P32856 288 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 CD68P34810 354 aaPredicted RBP23.82■■□□□ 1.4
RAB40B-201ENST00000269347 VARS2Q5ST30 1063 aaKnown RBP23.82■■□□□ 1.4
RAB40B-201ENST00000269347 GKAP1Q5VSY0 366 aaPredicted RBP23.82■■□□□ 1.4
RAB40B-201ENST00000269347 NUGGCQ68CJ6 796 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 PPP1R21Q6ZMI0 780 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 SCML4Q8N228 414 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 ZSCAN18Q8TBC5 510 aaPredicted RBP23.82■■□□□ 1.4
RAB40B-201ENST00000269347 ARNTL2Q8WYA1 636 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 DPF3Q92784 378 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 CASD1Q96PB1 797 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 TGS1Q96RS0 853 aaKnown RBP23.82■■□□□ 1.4
RAB40B-201ENST00000269347 PNPLA8Q9NP80 782 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 NDFIP2Q9NV92 336 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 MARCH5Q9NX47 278 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.82■■□□□ 1.4
RAB40B-201ENST00000269347 MAD1L1Q9Y6D9 718 aa23.82■■□□□ 1.4
RAB40B-201ENST00000269347 A0A1W2PQH9 124 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 IRAK2O43187 625 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 KIAA0754O94854 1291 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 OAS1P00973 400 aaKnown RBP23.81■■□□□ 1.4
RAB40B-201ENST00000269347 TSHRP16473 764 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 PDK1Q15118 436 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 MTFR1Q15390 333 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 CEP57Q86XR8 500 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 CACNA2D3Q8IZS8 1091 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 ATAD1Q8NBU5 361 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 SCLYQ96I15 445 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 SMC6Q96SB8 1091 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 SIK2Q9H0K1 926 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 SLC17A7Q9P2U7 560 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 PLXNA3P51805 1871 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 NYNRINQ9P2P1 1898 aaKnown RBP23.81■■□□□ 1.4
RAB40B-201ENST00000269347 WDR27A2RRH5 827 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 USP12O75317 370 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 VNN2O95498 520 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 SRGAP2BP0DMP2 458 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 EPHB2P29323 1055 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 PPM1NQ8N819 430 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 OXNAD1Q96HP4 312 aaPredicted RBP23.81■■□□□ 1.4
RAB40B-201ENST00000269347 EBNA1BP2Q99848 306 aaKnown RBP23.81■■□□□ 1.4
RAB40B-201ENST00000269347 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.81■■□□□ 1.4
RAB40B-201ENST00000269347 IL1RAPL1Q9NZN1 696 aa23.81■■□□□ 1.4
RAB40B-201ENST00000269347 HMX2A2RU54 273 aa23.8■■□□□ 1.4
RAB40B-201ENST00000269347 TMEM189-UBE2V1I3L0A0 370 aa23.8■■□□□ 1.4
RAB40B-201ENST00000269347 CA4P22748 312 aa23.8■■□□□ 1.4
RAB40B-201ENST00000269347 AIF1P55008 147 aa23.8■■□□□ 1.4
RAB40B-201ENST00000269347 NR1H3Q13133 447 aa23.8■■□□□ 1.4
RAB40B-201ENST00000269347 PLEKHG4Q58EX7 1191 aa23.8■■□□□ 1.4
RAB40B-201ENST00000269347 ZNF276Q8N554 614 aa23.8■■□□□ 1.4
RAB40B-201ENST00000269347 SLAIN1Q8ND83 568 aa23.8■■□□□ 1.4
RAB40B-201ENST00000269347 SLCO1B3Q9NPD5 702 aa23.8■■□□□ 1.4
RAB40B-201ENST00000269347 TMEM161AQ9NX61 479 aa23.8■■□□□ 1.4
RAB40B-201ENST00000269347 NKIRAS1Q9NYS0 192 aa23.8■■□□□ 1.4
RAB40B-201ENST00000269347 GGT7Q9UJ14 662 aa23.8■■□□□ 1.4
RAB40B-201ENST00000269347 GREB1Q4ZG55 1949 aa23.8■■□□□ 1.4
RAB40B-201ENST00000269347 SNX3O60493 162 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 PRKCHP24723 683 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 ADRA1DP25100 572 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 HCAR3P49019 387 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 APLP1P51693 650 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 TAS1R1Q7RTX1 841 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 REM2Q8IYK8 340 aaPredicted RBP23.79■■□□□ 1.4
RAB40B-201ENST00000269347 CRIPAKQ8N1N5 446 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 BANPQ8N9N5 519 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 BCL7CQ8WUZ0 217 aaPredicted RBP23.79■■□□□ 1.4
RAB40B-201ENST00000269347 CABS1Q96KC9 395 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 MAGEB18Q96M61 343 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 AGAP3Q96P47 875 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 ARHGEF38Q9NXL2 777 aa23.79■■□□□ 1.4
RAB40B-201ENST00000269347 FNDC1Q4ZHG4 1894 aaPredicted RBP23.79■■□□□ 1.4
RAB40B-201ENST00000269347 ZBTB24O43167 697 aaPredicted RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms