RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CDH17Q12864 832 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 DGKKQ5KSL6 1271 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 ZSCAN18Q8TBC5 510 aaPredicted RBP12.36□□□□□ -0.43
COL8A1-201ENST00000261037 TCP10LQ8TDR4 215 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 GLIS2Q9BZE0 524 aaPredicted RBP12.36□□□□□ -0.43
COL8A1-201ENST00000261037 ZDHHC6Q9H6R6 413 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 PCDH9Q9HC56 1237 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 DUSP12Q9UNI6 340 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 N6AMT1Q9Y5N5 214 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 VAPBO95292 243 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 HMGCRP04035 888 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 FAM153BP0C7A2 387 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 PLK1P53350 603 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 FAM153CQ494X1 144 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 SLC27A1Q6PCB7 646 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 ISLR2Q6UXK2 745 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 LRRN4CLQ8ND94 238 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 SLIT1O75093 1534 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 KCNK1O00180 336 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 KIF1CO43896 1103 aaKnown RBP12.36□□□□□ -0.43
COL8A1-201ENST00000261037 ETS1P14921 441 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 PSMB9P28065 219 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 C1QBPQ07021 282 aaKnown RBP12.36□□□□□ -0.43
COL8A1-201ENST00000261037 BTG3Q14201 252 aaPredicted RBP12.36□□□□□ -0.43
COL8A1-201ENST00000261037 CDKAL1Q5VV42 579 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 WDR93Q6P2C0 686 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 ZBTB49Q6ZSB9 765 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 GATAD2AQ86YP4 633 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 P2RX7Q99572 595 aaKnown RBP12.36□□□□□ -0.43
COL8A1-201ENST00000261037 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.36□□□□□ -0.43
COL8A1-201ENST00000261037 SPG21Q9NZD8 308 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 NINJ2Q9NZG7 142 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 DMGDHQ9UI17 866 aaKnown RBP12.36□□□□□ -0.43
COL8A1-201ENST00000261037 FBXO10Q9UK96 956 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 CRYL1Q9Y2S2 319 aa12.36□□□□□ -0.43
COL8A1-201ENST00000261037 A0A087X0B3 334 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 CCDC154A6NI56 674 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 NKRFO15226 690 aaKnown RBP eCLIP12.35□□□□□ -0.43
COL8A1-201ENST00000261037 PEX1O43933 1283 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 SERPINF2P08697 491 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 YBX3P16989 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
COL8A1-201ENST00000261037 PTENP60484 403 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 SFSWAPQ12872 951 aaKnown RBP12.35□□□□□ -0.43
COL8A1-201ENST00000261037 NCF4Q15080 339 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 POM121L1PQ3SYA9 428 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 OTUD3Q5T2D3 398 aaPredicted RBP12.35□□□□□ -0.43
COL8A1-201ENST00000261037 COMMD2Q86X83 199 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 POU5F2Q8N7G0 328 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 MARK4Q96L34 752 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 TKTL2Q9H0I9 626 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 TCF7L2Q9NQB0 619 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 DDX4Q9NQI0 724 aaKnown RBP12.35□□□□□ -0.43
COL8A1-201ENST00000261037 PDP2Q9P2J9 529 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 SLC24A2Q9UI40 661 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 DNPEPQ9ULA0 475 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 BTN3A1O00481 513 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 ATP9AO75110 1047 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 SLC26A2P50443 739 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 MAPK10P53779 464 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 FASTKQ14296 549 aaKnown RBP12.35□□□□□ -0.43
COL8A1-201ENST00000261037 PKN2Q16513 984 aaKnown RBP12.35□□□□□ -0.43
COL8A1-201ENST00000261037 TMEM159Q96B96 161 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 PAPOLBQ9NRJ5 636 aaKnown RBP12.35□□□□□ -0.43
COL8A1-201ENST00000261037 MAP10Q9P2G4 905 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 RAD51BO15315 384 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 IFNA14P01570 189 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 IL1R1P14778 569 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 PECAM1P16284 738 aaPredicted RBP12.35□□□□□ -0.43
COL8A1-201ENST00000261037 GTF2E2P29084 291 aaKnown RBP12.35□□□□□ -0.43
COL8A1-201ENST00000261037 RENBPP51606 427 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 SPANXN3Q5MJ09 141 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 MFSD7Q6UXD7 560 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 CYP2R1Q6VVX0 501 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 PIK3R5Q8WYR1 880 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 SEMA6AQ9H2E6 1030 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 CDHR5Q9HBB8 845 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 ZFYVE1Q9HBF4 777 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 XPNPEP3Q9NQH7 507 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 EML1O00423 815 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 CES2O00748 559 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 DNALI1O14645 258 aaPredicted RBP12.35□□□□□ -0.43
COL8A1-201ENST00000261037 GRK4P32298 578 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 RARRES1P49788 294 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 DLG4P78352 724 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 OTOP1Q7RTM1 612 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 EPHX4Q8IUS5 362 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 ZFPM1Q8IX07 1006 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 DDHD1Q8NEL9 900 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 LRRN4Q8WUT4 740 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 SH3GL2Q99962 352 aa12.35□□□□□ -0.43
COL8A1-201ENST00000261037 E5RJQ4 531 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 RBAK-RBAKDNI3L0D1 243 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 RARAP10276 462 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 TYMPP19971 482 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 SP100P23497 879 aaPredicted RBP12.34□□□□□ -0.43
COL8A1-201ENST00000261037 PSEN2P49810 448 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 TGM3Q08188 693 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 NTRK3Q16288 839 aa12.34□□□□□ -0.43
COL8A1-201ENST00000261037 CDK5RAP1Q96SZ6 601 aaKnown RBP12.34□□□□□ -0.43
COL8A1-201ENST00000261037 CPNE1Q99829 537 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms