RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 SPATC1LQ9H0A9 340 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 LATS2Q9NRM7 1088 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 CRYL1Q9Y2S2 319 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 RGPD2P0DJD1 1756 aa14.07□□□□□ -0.16
NFKB1-201ENST00000226574 UBDO15205 165 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 NDUFS3O75489 264 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 ITGA2BP08514 1039 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 CYP2B6P20813 491 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 ABCE1P61221 599 aaKnown RBP14.06□□□□□ -0.16
NFKB1-201ENST00000226574 ATP1A4Q13733 1029 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 FBXO47Q5MNV8 452 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 DNAJC14Q6Y2X3 702 aaPredicted RBP14.06□□□□□ -0.16
NFKB1-201ENST00000226574 SZRD1Q7Z422 152 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 THEM5Q8N1Q8 247 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 SLC44A1Q8WWI5 657 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 SPATA17Q96L03 361 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 MBOAT7Q96N66 472 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 ABI2Q9NYB9 513 aaPredicted RBP14.06□□□□□ -0.16
NFKB1-201ENST00000226574 C9JVG2 144 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 ACADSBP45954 432 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 GSCP56915 257 aaPredicted RBP14.06□□□□□ -0.16
NFKB1-201ENST00000226574 URB1O60287 2271 aaKnown RBP14.06□□□□□ -0.16
NFKB1-201ENST00000226574 CYP1B1Q16678 543 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 SLC44A4Q53GD3 710 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 TBCELQ5QJ74 424 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 PPP1R26Q5T8A7 1209 aaPredicted RBP14.06□□□□□ -0.16
NFKB1-201ENST00000226574 WLSQ5T9L3 541 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 ADGRF2Q8IZF7 708 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 MAGEC3Q8TD91 643 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 WDR41Q9HAD4 459 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 TBC1D23Q9NUY8 699 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 RNF181Q9P0P0 153 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 PLLPQ9Y342 182 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 FMN2Q9NZ56 1722 aa14.06□□□□□ -0.16
NFKB1-201ENST00000226574 CASTOR2A6NHX0 329 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 PRPF4O43172 522 aaKnown RBP eCLIP14.05□□□□□ -0.16
NFKB1-201ENST00000226574 COX4I1P13073 169 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 IL1R2P27930 398 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 SCIMPQ6UWF3 145 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 RBM44Q6ZP01 1051 aaKnown RBP14.05□□□□□ -0.16
NFKB1-201ENST00000226574 FAM83AQ86UY5 434 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 C12orf56Q8IXR9 622 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 KCTD4Q8WVF5 259 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 JADE3Q92613 823 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 NDNQ99608 321 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 APOL5Q9BWW9 433 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 MYH7P12883 1935 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 DCCP43146 1447 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 AGRPO00253 132 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 CLDN5O00501 218 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 DDHD2O94830 711 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 LYNP07948 512 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 CPB1P15086 417 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 PEX2P28328 305 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 GTF2H3Q13889 308 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 NOTUMQ6P988 496 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 MARK2Q7KZI7 788 aaKnown RBP14.05□□□□□ -0.16
NFKB1-201ENST00000226574 GPR141Q7Z602 305 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 SETD3Q86TU7 594 aaPredicted RBP14.05□□□□□ -0.16
NFKB1-201ENST00000226574 FAM228AQ86W67 206 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 REPS2Q8NFH8 660 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 C10orf82Q8WW14 230 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 ANKRD27Q96NW4 1050 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 NT5MQ9NPB1 228 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 AAASQ9NRG9 546 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 CD274Q9NZQ7 290 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 DSEQ9UL01 958 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 ZNF536O15090 1300 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 DISP2A7MBM2 1401 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 LINC00854A0A1B0GVQ3 168 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 SYNDIG1LA6NDD5 238 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 HNRNPRO43390 633 aaKnown RBP14.05□□□□□ -0.16
NFKB1-201ENST00000226574 ALBP02768 609 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 HMOX2P30519 316 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 NEK3P51956 506 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 CDH13P55290 713 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 FOLH1Q04609 750 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 DLG2Q15700 870 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 DCAF4L1Q3SXM0 396 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 PYROXD2Q8N2H3 581 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 PLD5Q8N7P1 536 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.05□□□□□ -0.16
NFKB1-201ENST00000226574 DNAJC1Q96KC8 554 aaKnown RBP14.05□□□□□ -0.16
NFKB1-201ENST00000226574 CHADO15335 359 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 BPGMP07738 259 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 YBX3P16989 372 aaKnown RBP eCLIP14.05□□□□□ -0.16
NFKB1-201ENST00000226574 ATICP31939 592 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 RABGGTBP53611 331 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 TWF1Q12792 350 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 SLC5A9Q2M3M2 681 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 ADGRD1Q6QNK2 874 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 KYAT3Q6YP21 454 aaKnown RBP14.05□□□□□ -0.16
NFKB1-201ENST00000226574 NKD2Q969F2 451 aaPredicted RBP14.05□□□□□ -0.16
NFKB1-201ENST00000226574 CERS2Q96G23 380 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 ACO2Q99798 780 aaKnown RBP14.05□□□□□ -0.16
NFKB1-201ENST00000226574 LPIN3Q9BQK8 851 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 BEGAINQ9BUH8 593 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 CYP3A43Q9HB55 503 aa14.05□□□□□ -0.16
NFKB1-201ENST00000226574 UBQLN1Q9UMX0 589 aaKnown RBP14.05□□□□□ -0.16
NFKB1-201ENST00000226574 TRDMT1O14717 391 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms