RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 ANKS1BQ7Z6G8 1248 aa10.91□□□□□ -0.66
CD4-201ENST00000011653 DDX53Q86TM3 631 aaKnown RBP10.91□□□□□ -0.66
CD4-201ENST00000011653 RNF139Q8WU17 664 aa10.91□□□□□ -0.66
CD4-201ENST00000011653 HERPUD2Q9BSE4 406 aa10.91□□□□□ -0.66
CD4-201ENST00000011653 DCLK3Q9C098 648 aa10.91□□□□□ -0.66
CD4-201ENST00000011653 YBX2Q9Y2T7 364 aaKnown RBP10.91□□□□□ -0.66
CD4-201ENST00000011653 BRWD1Q9NSI6 2320 aa10.91□□□□□ -0.66
CD4-201ENST00000011653 BRAFP15056 766 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 ATF6P18850 670 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 YWHAGP61981 247 aaKnown RBP eCLIP10.9□□□□□ -0.66
CD4-201ENST00000011653 TAP1Q03518 808 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 TWF1Q12792 350 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 RIPK1Q13546 671 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 KYNUQ16719 465 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 CA9Q16790 459 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 CCDC185Q8N715 623 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 BBOF1Q8ND07 529 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 ZNF461Q8TAF7 563 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 SPPL2BQ8TCT7 592 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 CKAP2Q8WWK9 683 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 NKX2-4Q9H2Z4 354 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 C10orf88Q9H8K7 445 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 CNGB3Q9NQW8 809 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 DNAJC17Q9NVM6 304 aaKnown RBP10.9□□□□□ -0.66
CD4-201ENST00000011653 TCEA3O75764 348 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 FYNP06241 537 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 PAX3P23760 479 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 IVDP26440 423 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 YWHAQP27348 245 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 STX2P32856 288 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 MATKP42679 507 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 HDAC4P56524 1084 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 SPATA21Q7Z572 469 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 SLC22A17Q8WUG5 538 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 CCDC77Q9BR77 488 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 ECT2Q9H8V3 914 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 CSNK1G1Q9HCP0 422 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 TRPC7Q9HCX4 862 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 NKIRAS1Q9NYS0 192 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 CTNNAL1Q9UBT7 734 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 ARL2BPQ9Y2Y0 163 aa10.9□□□□□ -0.66
CD4-201ENST00000011653 LPXNO60711 386 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 RFPL2O75678 378 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 CREB1P16220 341 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 VPS41P49754 854 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 C10orf120Q5SQS8 335 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 ARHGEF18Q6ZSZ5 1173 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 ARL10Q8N8L6 244 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 CCHCR1Q8TD31 782 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 KCTD13Q8WZ19 329 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 N4BP2L2Q92802 583 aaPredicted RBP10.89□□□□□ -0.67
CD4-201ENST00000011653 IGFLR1Q9H665 355 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 PIGVQ9NUD9 493 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 OSER1Q9NX31 292 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 SMPD4Q9NXE4 827 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 NINJ2Q9NZG7 142 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 STAP1Q9ULZ2 295 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 CCL16O15467 120 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 TGM5O43548 720 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 CDH16O75309 829 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 TRUB2O95900 331 aaKnown RBP10.89□□□□□ -0.67
CD4-201ENST00000011653 HAPLN1P10915 354 aaPredicted RBP10.89□□□□□ -0.67
CD4-201ENST00000011653 NQO1P15559 274 aaKnown RBP10.89□□□□□ -0.67
CD4-201ENST00000011653 NCALDP61601 193 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 PPP2R2DQ66LE6 453 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 SLC8B1Q6J4K2 584 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 RFX6Q8HWS3 928 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 CCDC89Q8N998 374 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 GDAP1Q8TB36 358 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 GDPD5Q8WTR4 605 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 TBC1D31Q96DN5 1066 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 FUBP3Q96I24 572 aaKnown RBP eCLIP10.89□□□□□ -0.67
CD4-201ENST00000011653 TGS1Q96RS0 853 aaKnown RBP10.89□□□□□ -0.67
CD4-201ENST00000011653 SNRNP25Q9BV90 132 aaKnown RBP10.89□□□□□ -0.67
CD4-201ENST00000011653 PBX4Q9BYU1 374 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 MLXIPLQ9NP71 852 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 SLC38A8A6NNN8 435 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 LINC00271P0C7V0 271 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 SRGAP2BP0DMP2 458 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 IRF1P10914 325 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 GPM6BQ13491 265 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 ZKSCAN8Q15776 578 aaPredicted RBP10.89□□□□□ -0.67
CD4-201ENST00000011653 RASIP1Q5U651 963 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 PPP1R21Q6ZMI0 780 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 CEP128Q6ZU80 1094 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 SCD5Q86SK9 330 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 SPPL3Q8TCT6 385 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 CCSER2Q9H7U1 834 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 SLC28A3Q9HAS3 691 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 DONSONQ9NYP3 566 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 LGALS13Q9UHV8 139 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 GGT7Q9UJ14 662 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 YIPF1Q9Y548 306 aa10.89□□□□□ -0.67
CD4-201ENST00000011653 TRANK1O15050 2925 aa10.88□□□□□ -0.67
CD4-201ENST00000011653 TNFRSF10BO14763 440 aa10.88□□□□□ -0.67
CD4-201ENST00000011653 TBC1D4O60343 1298 aa10.88□□□□□ -0.67
CD4-201ENST00000011653 FBXO21O94952 628 aa10.88□□□□□ -0.67
CD4-201ENST00000011653 CTSAP10619 480 aa10.88□□□□□ -0.67
CD4-201ENST00000011653 NOS2P35228 1153 aa10.88□□□□□ -0.67
CD4-201ENST00000011653 COPS2P61201 443 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms