RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 DxoO70348 397 aa31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 MsnP26041 577 aaKnown RBP31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Nap1l1P28656 391 aaKnown RBP31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 AcdQ5EE38 416 aa31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Ctnna2Q61301 953 aa31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Ndrg1Q62433 394 aa31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Q6PAC4 1279 aa31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Kbtbd3Q8BHI4 607 aa31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Sh3rf2Q8BZT2 735 aa31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 TdrpQ8C5P7 182 aa31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Vangl2Q91ZD4 521 aa31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 NonoQ99K48 473 aaKnown RBP31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Aldoart1A6ZI46 419 aa31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Gm3182K7N6T8 263 aa31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Cldn4O35054 210 aa31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Dsc3P55850 896 aa31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Agbl1Q09M05 972 aa31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Ncapg2Q6DFV1 1138 aa31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Mpp7Q8BVD5 576 aa31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Q9D937 123 aaKnown RBP31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Il18rapQ9Z2B1 614 aa31.42■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 CstaP56567 97 aa31.41■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 VcpQ01853 806 aaKnown RBP31.41■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 IdsQ08890 552 aa31.41■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Rnf43Q5NCP0 784 aa31.41■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Olfr20Q7TRX9 314 aa31.41■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Olfr213Q7TS32 327 aa31.41■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Fam193aQ8CGI1 1231 aaKnown RBP31.41■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Gas2l1Q8JZP9 678 aa31.41■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Pcdha3Q91Y16 942 aa31.41■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Srgap2Q91Z67 1071 aa31.41■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Sh2b1Q91ZM2 756 aa31.41■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 CrebzfQ91ZR3 358 aa31.41■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 EtfbQ9DCW4 255 aaKnown RBP31.41■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 ParvbQ9ES46 365 aa31.41■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Elf4Q9Z2U4 655 aa31.41■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 E230025N22RikG5E8S3 482 aa31.4■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Pex5O09012 639 aa31.4■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 AfpP02772 605 aa31.4■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Glb1P23780 647 aa31.4■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 TshrP47750 764 aa31.4■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Gng11P61953 73 aa31.4■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Tmem108Q8BHE4 574 aa31.4■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Sirt5Q8K2C6 310 aa31.4■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Tbx22Q8K402 517 aa31.4■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Adgrf1Q8VEC3 908 aa31.4■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 PnkpQ9JLV6 522 aaKnown RBP31.4■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Piezo1E2JF22 2547 aa31.4■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 DgkiD3YWQ0 1071 aa31.39■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Arfip1G5E8V9 373 aa31.39■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Gm14496K7N5U4 849 aa31.39■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Fam196aQ3USH1 422 aa31.39■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Ccdc185Q3V118 621 aa31.39■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Fbxo39Q5NBU5 443 aa31.39■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Tbc1d1Q60949 1255 aa31.39■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 SugctQ7TNE1 436 aa31.39■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Il17reQ8BH06 637 aa31.39■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 DcakdQ8BHC4 231 aaKnown RBP31.39■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Arhgap12Q8C0D4 838 aa31.39■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Dhcr24Q8VCH6 516 aaKnown RBP31.39■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Rprd1aQ8VDS4 312 aa31.39■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Pex6Q99LC9 981 aa31.39■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Ubqln5Q9D4I8 510 aa31.39■■■□□ 2.62
Ctdnep1-201ENSMUST00000108593 Gm14525B1AZA0 212 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Gm2012B1B0R1 212 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Gm6205E9PZS2 359 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Tnk2O54967 1055 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 EmbP21995 330 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 TubP50586 505 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Trim38Q5SZ99 471 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Gm14819Q62478 212 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Rab34Q64008 259 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Wee2Q66JT0 555 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Tbc1d31Q6NXY1 996 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Krit1Q6S5J6 736 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Zfp397Q7TNK4 527 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 C5ar2Q8BW93 344 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Ccdc187Q8C5V8 958 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Gm6367Q8C6L9 287 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Ccdc17Q8CE13 565 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Fbxw7Q8VBV4 629 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Akr1c14Q91WT7 323 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 EpgnQ924X1 152 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 PapolbQ9WVP6 641 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Slc23a1Q9Z2J0 605 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Trpm6Q8CIR4 2028 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Cyp4a14O35728 507 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 MaptP10637 733 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Rps6ka1P18653 724 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Mkl2P59759 1080 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Gjb5Q02739 271 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Mindy4Q3UQI9 744 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Itga3Q62470 1053 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Rimbp2Q80U40 1072 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Rnaseh2bQ80ZV0 308 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Spns2Q91VM4 549 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Cybrd1Q925G2 290 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Kdelr1Q99JH8 212 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 HgsQ99LI8 775 aa31.38■■■□□ 2.61
Ctdnep1-201ENSMUST00000108593 Ovca2Q9D7E3 225 aa31.38■■■□□ 2.61
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms