RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Polr1cP52432 346 aaKnown RBP16.77■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Nrp1P97333 923 aa16.77■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Commd7Q8BG94 200 aa16.77■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Efcab1Q9D3N2 212 aa16.77■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Spata6lB2RV46 347 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Gm2956E9PVJ0 216 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Gm5796E9Q7M8 205 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Ccdc7bE9Q9Y3 381 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Gm3629K7N6Y2 205 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Gm10340K7N708 205 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Gm8108K7N734 216 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Pik3r5Q5SW28 871 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Rabl6Q5U3K5 725 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Dpysl3Q62188 570 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Magee1Q6PCZ4 918 aaKnown RBP16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Prpf38bQ80SY5 542 aaKnown RBP16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Rmnd5aQ80YQ8 391 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Ap3m2Q8R2R9 418 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Alas1Q8VC19 642 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Cd300ldQ8VCH2 221 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Gpc1Q9QZF2 557 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Rhox3fA2ANE1 215 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Zmynd12A2BGJ5 363 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 RerglB2RVE2 204 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 PkmP52480 531 aaKnown RBP16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Q810S2 196 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Slitrk6Q8C110 840 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Slc8a2Q8K596 921 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 IlkapQ8R0F6 392 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Ubqln1Q8R317 582 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Ak5Q920P5 562 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Mrpl11Q9CQF0 192 aaKnown RBP16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Castor1Q9CWQ8 331 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Pkp3Q9QY23 797 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Gm2244L7N2A3 218 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Capn6O35646 641 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Grpel2O88396 224 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Tars2Q3UQ84 723 aaKnown RBP16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Macrod2Q3UYG8 475 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Foxn1Q61575 648 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Clca2Q8BG22 942 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Q8BGA7 448 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Cnpy4Q8BQ47 245 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Rab15Q8K386 212 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Adam32Q8K410 754 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Slc5a2Q923I7 670 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Znf804aA2AKY4 1200 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Akap1O08715 857 aaKnown RBP16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Mt-CybP00158 381 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Chsy1Q6ZQ11 800 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Prkaa2Q8BRK8 552 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Adcy4Q91WF3 1077 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Slc39a3Q99K24 317 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Pole4Q9CQ36 118 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 RhouQ9EQT3 261 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Zfp811A0A0J9YU71 552 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Zfp612A0A1D5RMC2 672 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Kif28pD3YXS5 1028 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 AgxtO35423 414 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Serpina6Q06770 397 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Cd36Q08857 472 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Gpsm3Q3U1Z5 159 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Gm5592Q3V0A6 857 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Sp140Q6NSQ5 534 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Olfr169Q7TS53 313 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Zswim6Q80TB7 1207 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Znf423Q80TS5 1292 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Pum1Q80U78 1189 aaKnown RBP16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Pkn2Q8BWW9 983 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Ahi1Q8K3E5 1047 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Sgms1Q8VCQ6 419 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Lrrc49Q91YK0 686 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Chmp1aQ921W0 196 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Mta3Q924K8 591 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Nkd1Q99MH6 471 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Josd2Q9CR30 188 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Thg1lQ9CY52 298 aa16.76■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Efcab6Q6P1E8 1516 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 CrymO54983 313 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 NfiaQ02780 532 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Cyp4b1Q64462 511 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Pm20d1Q8C165 503 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Mtrf1Q8K126 446 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 QpctQ9CYK2 362 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Adarb2Q9JI20 745 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Arl6O88848 186 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Tph1P17532 447 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Gata5P97489 404 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 ZufspQ3T9Z9 577 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Coq10bQ3THF9 240 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Alkbh5Q3TSG4 395 aaKnown RBP16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Ccdc185Q3V118 621 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Atp13a4Q5XF90 1193 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Sh3rf1Q69ZI1 892 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Tspan18Q80WR1 248 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Tmem179Q8BHH9 233 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Pi4kbQ8BKC8 816 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Hdac7Q8C2B3 938 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Mrgprx1Q8CIP3 322 aa16.75■□□□□ 0.27
Col17a1-202ENSMUST00000086923 Ppp1r16bQ8VHQ3 568 aa16.75■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms